RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 SLC6A7Q99884 636 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 CMSS1Q9BQ75 279 aaKnown RBP10.29□□□□□ -0.76
COL25A1-202ENST00000399127 POFUT1Q9H488 388 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 SCP2D1Q9UJQ7 156 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 A0A0A6YYH2 397 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 A6NJ64 397 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 TMEM14DPA8MWL7 114 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 SULT1C2O00338 296 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 SOCS1O15524 211 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 ZNF32P17041 273 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 CTSSP25774 331 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 CASRP41180 1078 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 HIST1H3AP68431 136 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 UBE2V2Q15819 145 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 HIST2H3PS2Q5TEC6 136 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 RAB12Q6IQ22 244 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 HIST2H3AQ71DI3 136 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 BPIFB2Q8N4F0 458 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 C12orf45Q8N5I9 185 aaPredicted RBP10.29□□□□□ -0.76
COL25A1-202ENST00000399127 TMEM229BQ8NBD8 167 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 FGFBP3Q8TAT2 258 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 PIGTQ969N2 578 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 FAM173AQ9BQD7 235 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 LPAR5Q9H1C0 372 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 ZNF703Q9H7S9 590 aaPredicted RBP10.29□□□□□ -0.76
COL25A1-202ENST00000399127 TMEM38BQ9NVV0 291 aa10.29□□□□□ -0.76
COL25A1-202ENST00000399127 DHRS3O75911 302 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 ITGB2P05107 769 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 FBP1P09467 338 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 SSBP1Q04837 148 aaKnown RBP10.28□□□□□ -0.76
COL25A1-202ENST00000399127 KISS1Q15726 138 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 ABLIM2Q6H8Q1 611 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 OR10R2Q8NGX6 335 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 ADAMTS17Q8TE56 1095 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 SPTSSAQ969W0 71 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 NKX6-2Q9C056 277 aaPredicted RBP10.28□□□□□ -0.76
COL25A1-202ENST00000399127 DNTTIP1Q9H147 329 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 UFSP2Q9NUQ7 469 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 PIPOXQ9P0Z9 390 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 GPR160Q9UJ42 338 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 NPTNQ9Y639 398 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 GPR37O15354 613 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 CDC14BO60729 498 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 RGS11O94810 467 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 IL5P05113 134 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 OTX1P32242 354 aaPredicted RBP10.28□□□□□ -0.76
COL25A1-202ENST00000399127 C3AR1Q16581 482 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 PLAC9Q5JTB6 97 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 TNFAIP8L1Q8WVP5 186 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 TMEM59Q9BXS4 323 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 TTTY12Q9BZ98 90 aa10.28□□□□□ -0.76
COL25A1-202ENST00000399127 DSPP15924 2871 aaKnown RBP10.27□□□□□ -0.76
COL25A1-202ENST00000399127 UBE2QL1A1L167 161 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 SNRPGP15A8MWD9 76 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 IGLV3-1P01715 115 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 S100A8P05109 93 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 ZNF735P0CB33 412 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 SPP1P10451 314 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 FCGR2AP12318 317 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 CPN1P15169 458 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 PCP4P48539 62 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 MECP2P51608 486 aaKnown RBP10.27□□□□□ -0.77
COL25A1-202ENST00000399127 H2BFSP57053 126 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 CRIP3Q6Q6R5 217 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 ASCL5Q7RTU5 278 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 GALNTL5Q7Z4T8 443 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 HSD17B13Q7Z5P4 300 aaPredicted RBP10.27□□□□□ -0.77
COL25A1-202ENST00000399127 VASH2Q86V25 355 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 FTMTQ8N4E7 242 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 CPNE4Q96A23 557 aaPredicted RBP10.27□□□□□ -0.77
COL25A1-202ENST00000399127 NARS2Q96I59 477 aaKnown RBP10.27□□□□□ -0.77
COL25A1-202ENST00000399127 DOCK7Q96N67 2140 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 FOXB1Q99853 325 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 ELL3Q9HB65 397 aaPredicted RBP10.27□□□□□ -0.77
COL25A1-202ENST00000399127 ZFHX2Q9C0A1 2572 aaPredicted RBP10.27□□□□□ -0.77
COL25A1-202ENST00000399127 ZNF292O60281 2723 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 A0A0U1RQV5 110 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 ZNF729A6NN14 1252 aaPredicted RBP10.27□□□□□ -0.77
COL25A1-202ENST00000399127 GOSR2O14653 212 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 SYNGR3O43761 229 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 LCATP04180 440 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 ACKR3P25106 362 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 HRH1P35367 487 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 HTR5AP47898 357 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 LHX2P50458 406 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 TSPAN5P62079 268 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 CXADRP78310 365 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 PLGLB1Q02325 96 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 RNASE10Q5GAN6 216 aaKnown RBP10.27□□□□□ -0.77
COL25A1-202ENST00000399127 TSPO2Q5TGU0 170 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 JMJD6Q6NYC1 403 aaPredicted RBP10.27□□□□□ -0.77
COL25A1-202ENST00000399127 SLC16A14Q7RTX9 510 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 NAXEQ8NCW5 288 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 OR1F12Q8NHA8 337 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 COQ8AQ8NI60 647 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 KCNG3Q8TAE7 436 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 CPT1CQ8TCG5 803 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 RAB3CQ96E17 227 aa10.27□□□□□ -0.77
COL25A1-202ENST00000399127 MRPS24Q96EL2 167 aaKnown RBP10.27□□□□□ -0.77
COL25A1-202ENST00000399127 PDCD10Q9BUL8 212 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms