RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 CRIP3Q6Q6R5 217 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 PEG10Q86TG7 708 aaKnown RBP13.19□□□□□ -0.3
MBD1-207ENST00000398488 CALHM1Q8IU99 346 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 CCDC54Q8NEL0 328 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 AQP3Q92482 292 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 GHSRQ92847 366 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 HPS1Q92902 700 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 ZNF488Q96MN9 340 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 PLEKHA1Q9HB21 404 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 ABCB9Q9NP78 766 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 FN1P02751 2386 aaKnown RBP13.19□□□□□ -0.3
MBD1-207ENST00000398488 SVEP1Q4LDE5 3571 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 FAM230AA0A1W2PPH8 454 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 OR5B21A6NL26 309 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 F5H0A9 414 aaPredicted RBP13.18□□□□□ -0.3
MBD1-207ENST00000398488 MYL12BO14950 172 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 AKR7A2O43488 359 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 IRF2P14316 349 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 AMY2BP19961 511 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 ZFP36P26651 326 aaKnown RBP13.18□□□□□ -0.3
MBD1-207ENST00000398488 MDH2P40926 338 aaKnown RBP13.18□□□□□ -0.3
MBD1-207ENST00000398488 MED21Q13503 144 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 TMEM155Q4W5P6 130 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 RBM48Q5RL73 367 aaKnown RBP13.18□□□□□ -0.3
MBD1-207ENST00000398488 FAM90A1Q86YD7 464 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 BATF2Q8N1L9 274 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 SMIM19Q96E16 107 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 PATZ1Q9HBE1 687 aaKnown RBP13.18□□□□□ -0.3
MBD1-207ENST00000398488 TRIM36Q9NQ86 728 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 ERGIC3Q9Y282 383 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 A0A1B0GW55 424 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 SRRM5B3KS81 715 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 LGALS8O00214 317 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 RGS10O43665 173 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 TGFAP01135 160 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 WNT2P09544 360 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 DUX4L2P0CJ85 424 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 DUX4L3P0CJ86 424 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 DUX4L4P0CJ87 422 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 DUX4L5P0CJ88 424 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 DUX4L6P0CJ89 424 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 DUX4L7P0CJ90 424 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 ATF1P18846 271 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 CFHR2P36980 270 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 GZMKP49863 264 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 DUX4L9Q6RFH8 374 aaPredicted RBP13.18□□□□□ -0.3
MBD1-207ENST00000398488 C1orf87Q8N0U7 546 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 OR13C9Q8NGT0 318 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 COMMD4Q9H0A8 199 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 YAE1D1Q9NRH1 226 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 CTSZQ9UBR2 303 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 DUX4Q9UBX2 424 aa13.18□□□□□ -0.3
MBD1-207ENST00000398488 NSD1Q96L73 2696 aaPredicted RBP13.17□□□□□ -0.3
MBD1-207ENST00000398488 SONP18583 2426 aaKnown RBP13.17□□□□□ -0.3
MBD1-207ENST00000398488 PLPP2O43688 288 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 GYPAP02724 150 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 ZNF12P17014 697 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 ZNF20P17024 532 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 HAAOP46952 286 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 TEX36Q5VZQ5 186 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 UTS2BQ765I0 119 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 FGFRL1Q8N441 504 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 PARP16Q8N5Y8 322 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 LINC01356Q8N9X3 169 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 OR5T2Q8NGG2 359 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 HAVCR2Q8TDQ0 301 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 C10orf35Q96D05 121 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 SPACA5Q96QH8 159 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 MND1Q9BWT6 205 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 CCDC90BQ9GZT6 254 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 SNTG1Q9NSN8 517 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 DHDHQ9UQ10 334 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 ZNF281Q9Y2X9 895 aa13.17□□□□□ -0.3
MBD1-207ENST00000398488 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.17□□□□□ -0.31e-7■■■■□ 20.8
MBD1-207ENST00000398488 TRBV5-5A0A0J9YX44 114 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 OOEPA6NGQ2 149 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 KIAA1324LA8MWY0 1029 aaPredicted RBP13.16□□□□□ -0.3
MBD1-207ENST00000398488 INAFM1C9JVW0 142 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 F8VVB4 439 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 F8VWA3 439 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 FSTL3O95633 263 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 CELP19835 753 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 AZGP1P25311 298 aaKnown RBP13.16□□□□□ -0.3
MBD1-207ENST00000398488 INSL4Q14641 139 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 SPHARQ15513 63 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 PRSS48Q7RTY5 328 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 OR51A2Q8NGJ7 313 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 OR10Z1Q8NGY1 313 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 TSEN15Q8WW01 171 aaKnown RBP13.16□□□□□ -0.3
MBD1-207ENST00000398488 PP6455Q8WZ26 134 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 RFT1Q96AA3 541 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 NKX3-1Q99801 234 aaPredicted RBP13.16□□□□□ -0.3
MBD1-207ENST00000398488 RASSF4Q9H2L5 321 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 TAS2R4Q9NYW5 299 aa13.16□□□□□ -0.3
MBD1-207ENST00000398488 J3QT63 122 aa13.15□□□□□ -0.3
MBD1-207ENST00000398488 PHF1O43189 567 aaPredicted RBP13.15□□□□□ -0.3
MBD1-207ENST00000398488 GATBO75879 557 aaKnown RBP13.15□□□□□ -0.3
MBD1-207ENST00000398488 INMTO95050 263 aa13.15□□□□□ -0.3
MBD1-207ENST00000398488 PLATP00750 562 aa13.15□□□□□ -0.3
MBD1-207ENST00000398488 MPZP25189 248 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms