RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 FAM78BQ5VT40 261 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 TMEM268Q5VZI3 342 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 C19orf35Q6ZS72 473 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 C5orf24Q7Z6I8 188 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 TMEM25Q86YD3 366 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 MRPL41Q8IXM3 137 aaKnown RBP5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 KREMEN2Q8NCW0 462 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 ZNF740Q8NDX6 193 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 FAM110DQ8TAY7 271 aaPredicted RBP5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 IRF7Q92985 503 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 MICU1Q9BPX6 476 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 ELOVL3Q9HB03 270 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 TMEM38BQ9NVV0 291 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 ASB6Q9NWX5 421 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 TAC3Q9UHF0 121 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 GPR132Q9UNW8 380 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 SH2B3Q9UQQ2 575 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 SLC17A4Q9Y2C5 497 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 PIEZO1Q92508 2521 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 PSMB11A5LHX3 300 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 NKX2-6A6NCS4 301 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 RNF212BA8MTL3 300 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 PPP5D1E7EU14 171 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 ABHD16AO95870 558 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 AMBPP02760 352 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 PRNPP04156 253 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 CST2P09228 141 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 CAV2P51636 162 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 BIDP55957 195 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 HOXC5Q00444 222 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 FABP5Q01469 135 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 SYPL1Q16563 259 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 TPTE2P1Q5T6R2 138 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 SLC39A11Q8N1S5 342 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 NAT6Q93015 286 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 NUS1Q96E22 293 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 MARVELD1Q9BSK0 173 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 BCL2L10Q9HD36 194 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 YARS2Q9Y2Z4 477 aaKnown RBP5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 NOTCH4Q99466 2003 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 CKAP5Q14008 2032 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 GABRPO00591 440 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 OR2T1O43869 369 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 MPC2O95563 127 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 TMEM50AO95807 157 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 CD79AP11912 226 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 SELEP16581 610 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 AVPR1BP47901 424 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 NCBP2P52298 156 aaKnown RBP eCLIP5.83□□□□□ -1.482e-6■□□□□ 10.8
TM9SF4-202ENST00000398022 RAP2BP61225 183 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 PRR5P85299 388 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 MGAT2Q10469 447 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 GAGE5Q13069 117 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 GAGE6Q13070 117 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 GNMTQ14749 295 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 LTC4SQ16873 150 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 TMEM128Q5BJH2 165 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 DCAF12L2Q5VW00 463 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 CBLN3Q6UW01 205 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 ZFP41Q8N8Y5 198 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 KCTD12Q96CX2 325 aaKnown RBP5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 MALSU1Q96EH3 234 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 MYO7AQ13402 2215 aa5.83□□□□□ -1.48
TM9SF4-202ENST00000398022 LINC01553A4QN01 128 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 ANKUB1A6NFN9 424 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 SOD1P00441 154 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 MBPP02686 304 aaPredicted RBP5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 DCNP07585 359 aaKnown RBP5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 GFRA1P56159 465 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 CAV3P56539 151 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 CLEC12AQ5QGZ9 265 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 NSUN5P2Q63ZY6 315 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 CD200R1LQ6Q8B3 271 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 TSTD1Q8NFU3 115 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 SFXN5Q8TD22 340 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 SUSD6Q92537 303 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 IL17FQ96PD4 163 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 LMAN1LQ9HAT1 526 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 LRP12Q9Y561 859 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 MYOFQ9NZM1 2061 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 CELSR3Q9NYQ7 3312 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 SH2D7A6NKC9 451 aaPredicted RBP5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 TGFBR3LH3BV60 316 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 DVL1O14640 695 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 OR1F1O43749 312 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 NCR1O76036 304 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 CDS2O95674 445 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 PRDX2P32119 198 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 PCBP4P57723 403 aaKnown RBP5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 TAS2R43P59537 309 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 PSMA6P60900 246 aaKnown RBP5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 GPR18Q14330 331 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 NUMA1Q14980 2115 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 PSG5Q15238 335 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 SRSF7Q16629 238 aaKnown RBP eCLIP5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 TIMM23BQ5SRD1 257 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 OR52L1Q8NGH7 329 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 OR6T1Q8NGN1 323 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 LYPD6BQ8NI32 183 aa5.82□□□□□ -1.48
TM9SF4-202ENST00000398022 MCHR2Q969V1 340 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms