RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 SPRY3O43610 288 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 GRPP07492 148 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 NAT2P11245 290 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 ELK1P19419 428 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 TNFSF8P32971 234 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 SERPINF1P36955 418 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 SLC22A6Q4U2R8 563 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 METAP1DQ6UB28 335 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-204ENST00000397443 FAM222BQ8WU58 562 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 LOC100289279A0A1B0GTE1 492 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 TMEM272A0A1B0GTI8 110 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 VSTM5A8MXK1 200 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 CALCBP10092 127 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 EFNB2P52799 333 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 ZP1P60852 638 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 GNG3P63215 75 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 RIN1Q13671 783 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 SLC25A26Q70HW3 274 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 WDR86Q86TI4 376 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 CDH26Q8IXH8 852 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 ZNF611Q8N823 705 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 CPNE2Q96FN4 548 aaPredicted RBP18.04■□□□□ 0.48
CPNE1-204ENST00000397443 DIRAS2Q96HU8 199 aa18.04■□□□□ 0.48
CPNE1-204ENST00000397443 A0A1W2PP11 408 aa18.03■□□□□ 0.48
CPNE1-204ENST00000397443 J3QKU1 62 aa18.03■□□□□ 0.48
CPNE1-204ENST00000397443 BMP4P12644 408 aa18.03■□□□□ 0.48
CPNE1-204ENST00000397443 CFPP27918 469 aa18.03■□□□□ 0.48
CPNE1-204ENST00000397443 ZNF672Q499Z4 452 aaPredicted RBP18.03■□□□□ 0.48
CPNE1-204ENST00000397443 HAGHLQ6PII5 290 aaPredicted RBP18.03■□□□□ 0.48
CPNE1-204ENST00000397443 NKIRAS2Q9NYR9 191 aa18.03■□□□□ 0.48
CPNE1-204ENST00000397443 CACNA1DQ01668 2161 aa18.03■□□□□ 0.48
CPNE1-204ENST00000397443 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.02■□□□□ 0.48
CPNE1-204ENST00000397443 OR5B21A6NL26 309 aa18.02■□□□□ 0.48
CPNE1-204ENST00000397443 SERPINA2P20848 420 aa18.02■□□□□ 0.48
CPNE1-204ENST00000397443 ZNF81P51508 661 aa18.02■□□□□ 0.48
CPNE1-204ENST00000397443 PDZK1IP1Q13113 114 aa18.02■□□□□ 0.48
CPNE1-204ENST00000397443 ELMOD3Q96FG2 381 aa18.02■□□□□ 0.48
CPNE1-204ENST00000397443 SLC22A4Q9H015 551 aa18.02■□□□□ 0.48
CPNE1-204ENST00000397443 BANF2Q9H503 90 aa18.02■□□□□ 0.48
CPNE1-204ENST00000397443 BPNT1O95861 308 aa18.02■□□□□ 0.47
CPNE1-204ENST00000397443 VSIG8P0DPA2 414 aa18.02■□□□□ 0.47
CPNE1-204ENST00000397443 APOBEC3AP31941 199 aaPredicted RBP18.02■□□□□ 0.47
CPNE1-204ENST00000397443 RBMXP38159 391 aaKnown RBP18.02■□□□□ 0.47
CPNE1-204ENST00000397443 PRAMEF6Q5VXH4 476 aa18.02■□□□□ 0.47
CPNE1-204ENST00000397443 CNIH2Q6PI25 160 aa18.02■□□□□ 0.47
CPNE1-204ENST00000397443 ZCCHC24Q8N2G6 241 aaKnown RBP18.02■□□□□ 0.47
CPNE1-204ENST00000397443 OR51F2Q8NH61 342 aa18.02■□□□□ 0.47
CPNE1-204ENST00000397443 SLC25A38Q96DW6 304 aa18.02■□□□□ 0.47
CPNE1-204ENST00000397443 TMEM204Q9BSN7 226 aa18.02■□□□□ 0.47
CPNE1-204ENST00000397443 C3orf80F5H4A9 247 aa18.01■□□□□ 0.47
CPNE1-204ENST00000397443 CRTAPO75718 401 aaPredicted RBP18.01■□□□□ 0.47
CPNE1-204ENST00000397443 MAB21L1Q13394 359 aa18.01■□□□□ 0.47
CPNE1-204ENST00000397443 RSU1Q15404 277 aa18.01■□□□□ 0.47
CPNE1-204ENST00000397443 UBE2NLQ5JXB2 153 aa18.01■□□□□ 0.47
CPNE1-204ENST00000397443 CMTM4Q8IZR5 234 aa18.01■□□□□ 0.47
CPNE1-204ENST00000397443 TMEM104Q8NE00 496 aa18.01■□□□□ 0.47
CPNE1-204ENST00000397443 SLAMF9Q96A28 289 aa18.01■□□□□ 0.47
CPNE1-204ENST00000397443 C1orf147Q96MC9 270 aaPredicted RBP18.01■□□□□ 0.47
CPNE1-204ENST00000397443 MRI1Q9BV20 369 aa18.01■□□□□ 0.47
CPNE1-204ENST00000397443 CXXC4Q9H2H0 198 aa18.01■□□□□ 0.47
CPNE1-204ENST00000397443 UFSP2Q9NUQ7 469 aa18.01■□□□□ 0.47
CPNE1-204ENST00000397443 RHBDL2Q9NX52 303 aa18.01■□□□□ 0.47
CPNE1-204ENST00000397443 KLF2Q9Y5W3 355 aaPredicted RBP18.01■□□□□ 0.47
CPNE1-204ENST00000397443 TENM4Q6N022 2769 aa18.01■□□□□ 0.47
CPNE1-204ENST00000397443 IGKV1-12A0A0C4DH73 117 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 SYNGR1O43759 233 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 IGKV1D-12P01611 117 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 ZNF154Q13106 437 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 UNC119Q13432 240 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 MOGQ16653 247 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 SPRNQ5BIV9 151 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 ZNF573Q86YE8 665 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 IZUMO1Q8IYV9 350 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 OR51I2Q9H344 312 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 EXTL2Q9UBQ6 330 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 ETV7Q9Y603 341 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 RHBDL1O75783 438 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 MPIG6BO95866 241 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 ART1P52961 327 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 GMFBP60983 142 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 SPANXN2Q5MJ10 180 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 LRRC28Q86X40 367 aaPredicted RBP18■□□□□ 0.47
CPNE1-204ENST00000397443 ZNF488Q96MN9 340 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 DHRS9Q9BPW9 319 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 ADAM30Q9UKF2 790 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 NOP16Q9Y3C1 178 aaKnown RBP18■□□□□ 0.47
CPNE1-204ENST00000397443 DCHS2Q6V1P9 2916 aa18■□□□□ 0.47
CPNE1-204ENST00000397443 CHD3Q12873 2000 aaKnown RBP17.99■□□□□ 0.47
CPNE1-204ENST00000397443 HELZ2Q9BYK8 2649 aaKnown RBP17.99■□□□□ 0.47
CPNE1-204ENST00000397443 A0A1W2PPR1 153 aa17.99■□□□□ 0.47
CPNE1-204ENST00000397443 A6NLC8 198 aa17.99■□□□□ 0.47
CPNE1-204ENST00000397443 M0R233 179 aa17.99■□□□□ 0.47
CPNE1-204ENST00000397443 CDIPTO14735 213 aa17.99■□□□□ 0.47
CPNE1-204ENST00000397443 TMEM127O75204 238 aa17.99■□□□□ 0.47
CPNE1-204ENST00000397443 HTR3BO95264 441 aa17.99■□□□□ 0.47
CPNE1-204ENST00000397443 DYNC1I2Q13409 638 aaKnown RBP17.99■□□□□ 0.47
CPNE1-204ENST00000397443 MPPED2Q15777 294 aa17.99■□□□□ 0.47
CPNE1-204ENST00000397443 CCDC190Q86UF4 302 aa17.99■□□□□ 0.47
CPNE1-204ENST00000397443 MUC15Q8N387 334 aa17.99■□□□□ 0.47
CPNE1-204ENST00000397443 SCCPDHQ8NBX0 429 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms