RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TSSK6Q9BXA6 273 aa7.11□□□□□ -1.27
CAPN3-208ENST00000397204 ZNF319Q9P2F9 582 aa7.11□□□□□ -1.27
CAPN3-208ENST00000397204 NLKQ9UBE8 527 aa7.11□□□□□ -1.27
CAPN3-208ENST00000397204 COL7A1Q02388 2944 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 IGKV1D-17A0A075B6S4 117 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 hCG_1809904A0A1W2PP81 198 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 A0A1W2PPE2 198 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 A0A1W2PR64 198 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 A0A1W2PRV1 198 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 RIIAD1A6NNX1 92 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 TNFRSF11BO00300 401 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 PAX4O43316 350 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 ANGPTL7O43827 346 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 H2BFMP0C1H6 154 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 VSIG10L2P0DP72 767 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 PSG2P11465 335 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 H2AFXP16104 143 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-208ENST00000397204 FAHP16930 419 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 PAICSP22234 425 aaKnown RBP7.1□□□□□ -1.27
CAPN3-208ENST00000397204 PRDX6P30041 224 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 DCTDP32321 178 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 OPRL1P41146 370 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 GABRA2P47869 451 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 LGALS4P56470 323 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 PRDX4Q13162 271 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 LINC01590Q5TEZ4 76 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 ZNF770Q6IQ21 691 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-208ENST00000397204 KCTD8Q6ZWB6 473 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 Q8N2B8 174 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 ZNRF1Q8ND25 227 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 WFDC9Q8NEX5 89 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 OR2T33Q8NG76 320 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 OR4F17Q8NGA8 305 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 OR8D4Q8NGM9 314 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 OR5K1Q8NHB7 308 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 C17orf50Q8WW18 174 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 PIGCQ92535 297 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 SDSLQ96GA7 329 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 OR4F4Q96R69 305 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 INTS14Q96SY0 518 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 RASL12Q9NYN1 266 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 LRP12Q9Y561 859 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 LYVE1Q9Y5Y7 322 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 V9GYQ6 96 aa7.1□□□□□ -1.27
CAPN3-208ENST00000397204 RYR3Q15413 4870 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 FAM90A8PA6NJQ4 464 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 VGLL3A8MV65 326 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 RRP9O43818 475 aaKnown RBP7.09□□□□□ -1.27
CAPN3-208ENST00000397204 BPNT1O95861 308 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 CLUP10909 449 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 ACKR3P25106 362 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 GNG3P63215 75 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 GFOD2Q3B7J2 385 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 NSUN5P1Q3KNT7 163 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 SPATS1Q496A3 300 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 TMEM200BQ69YZ2 307 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 NDUFA11Q86Y39 141 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 CALHM1Q8IU99 346 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 ERI1Q8IV48 349 aaKnown RBP7.09□□□□□ -1.27
CAPN3-208ENST00000397204 ZDHHC23Q8IYP9 409 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 FAM185AQ8N0U4 392 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 C11orf42Q8N5U0 333 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 OR9Q2Q8NGE9 314 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 OR5A2Q8NGI9 324 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 OR6N2Q8NGY6 317 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 R3HDM4Q96D70 268 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 RHOVQ96L33 236 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 CDRT15Q96T59 188 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 BTBD10Q9BSF8 475 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 MYLK2Q9H1R3 596 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 OR51I2Q9H344 312 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 NIPAL2Q9H841 368 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 CMC2Q9NRP2 79 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 SERTAD4Q9NUC0 356 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 TBC1D23Q9NUY8 699 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 DNAJC27Q9NZQ0 273 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 ZNF222Q9UK12 451 aa7.09□□□□□ -1.27
CAPN3-208ENST00000397204 DNAH3Q8TD57 4116 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 DNAH9Q9NYC9 4486 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 ACOD1A6NK06 481 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 ARPC2O15144 300 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 MTRF1O75570 445 aaKnown RBP7.08□□□□□ -1.28
CAPN3-208ENST00000397204 RHBDL1O75783 438 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 CCNB2O95067 398 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 TFF1P04155 84 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 CD28P10747 220 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 ATP6V1B1P15313 513 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 ZNF3P17036 446 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 MSX2P35548 267 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-208ENST00000397204 GPM6AP51674 278 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 CAPZA1P52907 286 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 RPL31P62899 125 aaKnown RBP7.08□□□□□ -1.28
CAPN3-208ENST00000397204 MICAQ29983 383 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 CEACAM21Q3KPI0 293 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 VAX1Q5SQQ9 334 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 CD300LDQ6UXZ3 194 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 THAP5Q7Z6K1 395 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 MRPL41Q8IXM3 137 aaKnown RBP7.08□□□□□ -1.28
CAPN3-208ENST00000397204 MKXQ8IYA7 352 aa7.08□□□□□ -1.28
CAPN3-208ENST00000397204 TMEM185AQ8NFB2 350 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms