RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 SRD5A2P31213 254 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 PLAURQ03405 335 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 VAMP3Q15836 100 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 PRSS36Q5K4E3 855 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 RNFT1Q5M7Z0 435 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 BLNKQ8WV28 456 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 MED30Q96HR3 178 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 TEX101Q9BY14 249 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 SRRQ9GZT4 340 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 CYSLTR2Q9NS75 346 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 UQCC1Q9NVA1 299 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 ERRFI1Q9UJM3 462 aaPredicted RBP6.44□□□□□ -1.38
UPF2-203ENST00000397053 CES1P1Q9UKY3 287 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 UBE2L5PA0A1B0GUS4 154 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 HRH1P35367 487 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 FZD5Q13467 585 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 TOMM34Q15785 309 aaPredicted RBP6.44□□□□□ -1.38
UPF2-203ENST00000397053 PDZD11Q5EBL8 140 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 NCR3LG1Q68D85 454 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 SPICQ8N5J4 248 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 OR2G2Q8NGZ5 317 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 OR1L3Q8NH93 324 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 PIK3IP1Q96FE7 263 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 FBXO8Q9NRD0 319 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 GLRX2Q9NS18 164 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.44□□□□□ -1.38
UPF2-203ENST00000397053 AMDHD2Q9Y303 409 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 CHST2Q9Y4C5 530 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 UGT2A1Q9Y4X1 527 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 NEURL1O76050 574 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 CCR2P41597 374 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 MRPS11P82912 194 aaKnown RBP6.44□□□□□ -1.38
UPF2-203ENST00000397053 NHLH1Q02575 133 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 NHLH2Q02577 135 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 OR4D9Q8NGE8 314 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 LURAP1Q96LR2 239 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 OR8B4Q96RC9 309 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 C11orf54Q9H0W9 315 aaPredicted RBP6.44□□□□□ -1.38
UPF2-203ENST00000397053 MBD1Q9UIS9 605 aaPredicted RBP6.44□□□□□ -1.38
UPF2-203ENST00000397053 NBASA2RRP1 2371 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 IGHV3-43A0A0B4J1X8 118 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 TEX50A0A1B0GTY4 177 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 B4GALT3O60512 393 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 GFRA3O60609 400 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 GYPAP02724 150 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 ZDHHC11BP0C7U3 371 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 IGHV3-43DP0DP04 118 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 FABP4P15090 132 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 CRISP2P16562 243 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 SNRPNP63162 240 aaKnown RBP6.44□□□□□ -1.38
UPF2-203ENST00000397053 PDCD1Q15116 288 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 RNF151Q2KHN1 245 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 BHLHA15Q7RTS1 189 aaPredicted RBP6.44□□□□□ -1.38
UPF2-203ENST00000397053 FAM26EQ8N5C1 309 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 OR52N4Q8NGI2 321 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 ADTRPQ96IZ2 230 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 MIEN1Q9BRT3 115 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 CXCL16Q9H2A7 254 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 DOK5Q9P104 306 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 SLC45A2Q9UMX9 530 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 INSIG2Q9Y5U4 225 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 SIAH2O43255 324 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 OR5AL1P0C617 328 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 USF1P22415 310 aaPredicted RBP6.44□□□□□ -1.38
UPF2-203ENST00000397053 HTR1DP28221 377 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 NXPH1P58417 271 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 ZNF141Q15928 474 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 RRN3P1Q2M238 152 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 PAQR6Q6TCH4 344 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 ETV3LQ6ZN32 361 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 CT55Q8WUE5 264 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 RPP25Q9BUL9 199 aaKnown RBP6.44□□□□□ -1.38
UPF2-203ENST00000397053 BCL2L10Q9HD36 194 aa6.44□□□□□ -1.38
UPF2-203ENST00000397053 CREBBPQ92793 2442 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 LIMS3P0CW19 117 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 LIMS4P0CW20 117 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 EMDP50402 254 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 HNRNPA3P51991 378 aaKnown RBP6.43□□□□□ -1.38
UPF2-203ENST00000397053 KRTDAPP60985 99 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 SLC35B1P78383 322 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 SPINK14Q6IE38 97 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 RPUSD3Q6P087 351 aaKnown RBP6.43□□□□□ -1.38
UPF2-203ENST00000397053 TGIF2LYQ8IUE0 185 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 MRGPRDQ8TDS7 321 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 CHAC2Q8WUX2 184 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 ADIPOR1Q96A54 375 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 LINC00052Q96N35 136 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 IGHV5-51A0A0C4DH38 117 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 FAM181BA6NEQ2 426 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 AKR7A2O43488 359 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 SBK3P0C264 359 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 OR3A1P47881 315 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 SUMO1P63165 101 aaKnown RBP6.43□□□□□ -1.38
UPF2-203ENST00000397053 FAM109BQ6ICB4 259 aaPredicted RBP6.43□□□□□ -1.38
UPF2-203ENST00000397053 ZNF774Q6NX45 483 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 DHRS11Q6UWP2 260 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 SLC16A12Q6ZSM3 486 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 KLHDC1Q8N7A1 406 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 OR5AP2Q8NGF4 316 aa6.43□□□□□ -1.38
UPF2-203ENST00000397053 OR2Y1Q8NGV0 311 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms