RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 HAAOP46952 286 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 QRFPP83859 136 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 UNC119Q13432 240 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 DCTN2Q13561 401 aaKnown RBP17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 SLC22A6Q4U2R8 563 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 BEX5Q5H9J7 111 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 OR2W3Q7Z3T1 314 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 CALHM1Q8IU99 346 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 KCNG3Q8TAE7 436 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 SOSTQ9BQB4 213 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 ATG5Q9H1Y0 275 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 ZNF442Q9H7R0 627 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 CFAP46Q8IYW2 2715 aa17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 IGLV3-9A0A075B6K5 115 aa17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 TMEM14DPA8MWL7 114 aa17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 ANGPTL7O43827 346 aa17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 CTAG2O75638 210 aa17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 PTBP1P26599 531 aaKnown RBP eCLIP17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 PITPNBP48739 271 aa17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 PDZK1IP1Q13113 114 aa17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 ZNF611Q8N823 705 aa17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 OR13G1Q8NGZ3 307 aa17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 MRPL24Q96A35 216 aaKnown RBP17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 PHF21AQ96BD5 680 aa17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 MRPL37Q9BZE1 423 aaKnown RBP17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 CST11Q9H112 138 aa17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 METTL9Q9H1A3 318 aa17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 MSL2Q9HCI7 577 aa17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 NKIRAS2Q9NYR9 191 aa17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 FBLN5Q9UBX5 448 aa17.42■□□□□ 0.38
VCPKMT-202ENST00000395860 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.41■□□□□ 0.38
VCPKMT-202ENST00000395860 H0YL77 283 aa17.41■□□□□ 0.38
VCPKMT-202ENST00000395860 MLNRO43193 412 aa17.41■□□□□ 0.38
VCPKMT-202ENST00000395860 CRTAPO75718 401 aaPredicted RBP17.41■□□□□ 0.38
VCPKMT-202ENST00000395860 SERPINA2P20848 420 aa17.41■□□□□ 0.38
VCPKMT-202ENST00000395860 RSU1Q15404 277 aa17.41■□□□□ 0.38
VCPKMT-202ENST00000395860 PYDC2Q56P42 97 aa17.41■□□□□ 0.38
VCPKMT-202ENST00000395860 C16orf87Q6PH81 154 aa17.41■□□□□ 0.38
VCPKMT-202ENST00000395860 BAIAP2L2Q6UXY1 529 aa17.41■□□□□ 0.38
VCPKMT-202ENST00000395860 Q6ZR03 302 aa17.41■□□□□ 0.38
VCPKMT-202ENST00000395860 OR10K1Q8NGX5 313 aa17.41■□□□□ 0.38
VCPKMT-202ENST00000395860 GAL3ST1Q99999 423 aa17.41■□□□□ 0.38
VCPKMT-202ENST00000395860 SRRQ9GZT4 340 aa17.41■□□□□ 0.38
VCPKMT-202ENST00000395860 A0A0G2JMP0 313 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 A0A0X1KG70 313 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 SHISA9B4DS77 424 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 MPIG6BO95866 241 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 CDK2P24941 298 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 TMEM69Q5SWH9 247 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 ZNF573Q86YE8 665 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 DMRTC2Q8IXT2 367 aaPredicted RBP17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 IZUMO1Q8IYV9 350 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 TMEM104Q8NE00 496 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 PXT1Q8NFP0 134 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 OR4M2Q8NGB6 313 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 OR10AD1Q8NGE0 317 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 OR51F2Q8NH61 342 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 BANF2Q9H503 90 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 DIABLOQ9NR28 239 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 MRPS7Q9Y2R9 242 aaKnown RBP17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 A0A1W2PP11 408 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 PLSCR5A0PG75 271 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 METTL21EPA6NDL7 271 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 VSTM5A8MXK1 200 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 CDC14BO60729 498 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 NR4A2P43354 598 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 KIR2DL3P43628 341 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 GPR176Q14439 515 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 PYHIN1Q6K0P9 492 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 ASCL4Q6XD76 172 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 SLC25A26Q70HW3 274 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 ZSCAN4Q8NAM6 433 aaPredicted RBP17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 TMEM59Q9BXS4 323 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 TAAR3PQ9P1P4 343 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 RNF115Q9Y4L5 304 aa17.4■□□□□ 0.38
VCPKMT-202ENST00000395860 ZNF780AO75290 641 aaPredicted RBP17.39■□□□□ 0.37
VCPKMT-202ENST00000395860 HTR3BO95264 441 aa17.39■□□□□ 0.37
VCPKMT-202ENST00000395860 CYB5AP00167 134 aa17.39■□□□□ 0.37
VCPKMT-202ENST00000395860 CSTBP04080 98 aaKnown RBP17.39■□□□□ 0.37
VCPKMT-202ENST00000395860 HAGHLQ6PII5 290 aaPredicted RBP17.39■□□□□ 0.37
VCPKMT-202ENST00000395860 BIVMQ86UB2 503 aa17.39■□□□□ 0.37
VCPKMT-202ENST00000395860 SPERTQ8NA61 448 aa17.39■□□□□ 0.37
VCPKMT-202ENST00000395860 SDHCQ99643 169 aaPredicted RBP17.39■□□□□ 0.37
VCPKMT-202ENST00000395860 CXXC4Q9H2H0 198 aa17.39■□□□□ 0.37
VCPKMT-202ENST00000395860 PLK3Q9H4B4 646 aa17.39■□□□□ 0.37
VCPKMT-202ENST00000395860 RABL2AQ9UBK7 228 aaPredicted RBP17.39■□□□□ 0.37
VCPKMT-202ENST00000395860 RABL2BQ9UNT1 228 aa17.39■□□□□ 0.37
VCPKMT-202ENST00000395860 IGKV1-12A0A0C4DH73 117 aa17.38■□□□□ 0.37
VCPKMT-202ENST00000395860 TMEM210A6NLX4 147 aa17.38■□□□□ 0.37
VCPKMT-202ENST00000395860 SIAH2O43255 324 aa17.38■□□□□ 0.37
VCPKMT-202ENST00000395860 XRCC3O43542 346 aa17.38■□□□□ 0.37
VCPKMT-202ENST00000395860 KDM4BO94953 1096 aa17.38■□□□□ 0.37
VCPKMT-202ENST00000395860 IGKV1D-12P01611 117 aa17.38■□□□□ 0.37
VCPKMT-202ENST00000395860 OR4A8P0C604 315 aa17.38■□□□□ 0.37
VCPKMT-202ENST00000395860 MGMTP16455 207 aa17.38■□□□□ 0.37
VCPKMT-202ENST00000395860 PITPNAQ00169 270 aa17.38■□□□□ 0.37
VCPKMT-202ENST00000395860 ADIPOQQ15848 244 aa17.38■□□□□ 0.37
VCPKMT-202ENST00000395860 CDH24Q86UP0 819 aa17.38■□□□□ 0.37
VCPKMT-202ENST00000395860 MKXQ8IYA7 352 aa17.38■□□□□ 0.37
VCPKMT-202ENST00000395860 GDPD1Q8N9F7 314 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms