RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 GABARAPH6UMI1 98 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 SPRY1O43609 319 aaPredicted RBP17.37■□□□□ 0.37
HDDC3-202ENST00000394272 PTHLHP12272 177 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 PPP3CBP16298 524 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 CA6P23280 308 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 CD40P25942 277 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 ASAH1Q13510 395 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 ZNF718Q3SXZ3 478 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 RAB12Q6IQ22 244 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 ACBD4Q8NC06 268 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 C19orf18Q8NEA5 215 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 PXT1Q8NFP0 134 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 BANF2Q9H503 90 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 PURGQ9UJV8 347 aaKnown RBP17.37■□□□□ 0.37
HDDC3-202ENST00000394272 PLCE1Q9P212 2302 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 A0A0A6YYD4 124 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 PLA2G10O15496 165 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 ANGPTL7O43827 346 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 CRTAPO75718 401 aaPredicted RBP17.37■□□□□ 0.37
HDDC3-202ENST00000394272 PTTG1O95997 202 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 CD3GP09693 182 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 KITLGP21583 273 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 GPM6AP51674 278 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 HACD4Q5VWC8 232 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 MINDY2Q8NBR6 621 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 OR10K1Q8NGX5 313 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 LILRB4Q8NHJ6 448 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 HIST1H2AAQ96QV6 131 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 NUDT16L1Q9BRJ7 211 aaKnown RBP17.37■□□□□ 0.37
HDDC3-202ENST00000394272 NICN1Q9BSH3 213 aa17.37■□□□□ 0.37
HDDC3-202ENST00000394272 IGKV1-12A0A0C4DH73 117 aa17.36■□□□□ 0.37
HDDC3-202ENST00000394272 WIPF3A6NGB9 483 aa17.36■□□□□ 0.37
HDDC3-202ENST00000394272 OR5B21A6NL26 309 aa17.36■□□□□ 0.37
HDDC3-202ENST00000394272 ZNF732B4DXR9 585 aa17.36■□□□□ 0.37
HDDC3-202ENST00000394272 SCGNO76038 276 aa17.36■□□□□ 0.37
HDDC3-202ENST00000394272 PLATP00750 562 aa17.36■□□□□ 0.37
HDDC3-202ENST00000394272 IGKV1D-12P01611 117 aa17.36■□□□□ 0.37
HDDC3-202ENST00000394272 MGMTP16455 207 aa17.36■□□□□ 0.37
HDDC3-202ENST00000394272 SERPINA2P20848 420 aa17.36■□□□□ 0.37
HDDC3-202ENST00000394272 RPS27AP62979 156 aaKnown RBP17.36■□□□□ 0.37
HDDC3-202ENST00000394272 SNTB2Q13425 540 aaKnown RBP17.36■□□□□ 0.37
HDDC3-202ENST00000394272 RNASE12Q5GAN4 147 aaKnown RBP17.36■□□□□ 0.37
HDDC3-202ENST00000394272 MTFR2Q6P444 385 aa17.36■□□□□ 0.37
HDDC3-202ENST00000394272 Q6ZNX1 250 aa17.36■□□□□ 0.37
HDDC3-202ENST00000394272 ZSCAN4Q8NAM6 433 aaPredicted RBP17.36■□□□□ 0.37
HDDC3-202ENST00000394272 OR52I2Q8NH67 350 aa17.36■□□□□ 0.37
HDDC3-202ENST00000394272 METTL9Q9H1A3 318 aa17.36■□□□□ 0.37
HDDC3-202ENST00000394272 IL36GQ9NZH8 169 aa17.36■□□□□ 0.37
HDDC3-202ENST00000394272 RBMX2Q9Y388 322 aaKnown RBP17.36■□□□□ 0.37
HDDC3-202ENST00000394272 FAM90A27PA6NNH2 459 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 ATXN7O15265 892 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-202ENST00000394272 GLRXP35754 106 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 FAM189A2Q15884 450 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 ST3GAL2Q16842 350 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 TRIM16LQ309B1 348 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 RGS7BPQ6MZT1 257 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-202ENST00000394272 WFDC8Q8IUA0 241 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 FAM89BQ8N5H3 189 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 ZNF611Q8N823 705 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 ZC3HAV1LQ96H79 300 aaKnown RBP17.35■□□□□ 0.37
HDDC3-202ENST00000394272 RNF170Q96K19 258 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 TM2D1Q9BX74 207 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 ELL3Q9HB65 397 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-202ENST00000394272 SPEF1Q9Y4P9 236 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 LINC00854A0A1B0GVQ3 168 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 MEIOCA2RUB1 952 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 ATP6V1G2-DDX39BF2Z307 99 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 ZNF780AO75290 641 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-202ENST00000394272 CHRM2P08172 466 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 PTAFRP25105 342 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 VEGFCP49767 419 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 FABP6P51161 128 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 MSMPQ1L6U9 139 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 TMEM108Q6UXF1 575 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 RNASE6Q93091 150 aaKnown RBP17.35■□□□□ 0.37
HDDC3-202ENST00000394272 WFIKKN1Q96NZ8 548 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 URM1Q9BTM9 101 aaKnown RBP17.35■□□□□ 0.37
HDDC3-202ENST00000394272 C11orf54Q9H0W9 315 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-202ENST00000394272 FZR1Q9UM11 496 aa17.35■□□□□ 0.37
HDDC3-202ENST00000394272 A0A1B0GUH1 482 aa17.34■□□□□ 0.37
HDDC3-202ENST00000394272 GCH1P30793 250 aa17.34■□□□□ 0.37
HDDC3-202ENST00000394272 HAAOP46952 286 aa17.34■□□□□ 0.37
HDDC3-202ENST00000394272 INPP1P49441 399 aa17.34■□□□□ 0.37
HDDC3-202ENST00000394272 GNG3P63215 75 aa17.34■□□□□ 0.37
HDDC3-202ENST00000394272 GPR176Q14439 515 aa17.34■□□□□ 0.37
HDDC3-202ENST00000394272 RSU1Q15404 277 aa17.34■□□□□ 0.37
HDDC3-202ENST00000394272 CDSNQ15517 529 aa17.34■□□□□ 0.37
HDDC3-202ENST00000394272 ZNF260Q3ZCT1 412 aa17.34■□□□□ 0.37
HDDC3-202ENST00000394272 GDPD3Q7L5L3 318 aa17.34■□□□□ 0.37
HDDC3-202ENST00000394272 OR8G5Q8NG78 346 aa17.34■□□□□ 0.37
HDDC3-202ENST00000394272 OR10R2Q8NGX6 335 aa17.34■□□□□ 0.37
HDDC3-202ENST00000394272 FCAMRQ8WWV6 532 aa17.34■□□□□ 0.37
HDDC3-202ENST00000394272 ERRFI1Q9UJM3 462 aaPredicted RBP17.34■□□□□ 0.37
HDDC3-202ENST00000394272 NOP16Q9Y3C1 178 aaKnown RBP17.34■□□□□ 0.37
HDDC3-202ENST00000394272 ORC5O43913 435 aa17.33■□□□□ 0.37
HDDC3-202ENST00000394272 SSX4O60224 188 aa17.33■□□□□ 0.37
HDDC3-202ENST00000394272 ZNF250P15622 560 aa17.33■□□□□ 0.37
HDDC3-202ENST00000394272 GDNFP39905 211 aa17.33■□□□□ 0.37
HDDC3-202ENST00000394272 RFX2P48378 723 aa17.33■□□□□ 0.37
HDDC3-202ENST00000394272 FAM76BQ5HYJ3 339 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms