RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 MTRF1O75570 445 aaKnown RBP12.4□□□□□ -0.42
CHMP3-202ENST00000393773 KRT36O76013 467 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 MPIG6BO95866 241 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 H2BFMP0C1H6 154 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 CCL3L1P16619 93 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 ZNF3P17036 446 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 GSTT1P30711 240 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 MSX2P35548 267 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-202ENST00000393773 ERVFRD-1P60508 538 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 RPL31P62899 125 aaKnown RBP12.4□□□□□ -0.42
CHMP3-202ENST00000393773 ZNF273Q14593 569 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 PLA1AQ53H76 456 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 TMEM219Q86XT9 240 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 AQP11Q8NBQ7 271 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 AQP3Q92482 292 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 CMTM5Q96DZ9 223 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 YY1AP1Q9H869 796 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 HEXA-AS1Q9H8Q6 139 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 USE1Q9NZ43 259 aa12.4□□□□□ -0.42
CHMP3-202ENST00000393773 RIIAD1A6NNX1 92 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 ODF3BA8MYP8 253 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 CCNB2O95067 398 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 IFNGP01579 166 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 LYNP07948 512 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 IGLL1P15814 213 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 PAICSP22234 425 aaKnown RBP12.39□□□□□ -0.43
CHMP3-202ENST00000393773 PRDX6P30041 224 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 MAGEA2P43356 314 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 CAPZA1P52907 286 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 GNG3P63215 75 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 CNN3Q15417 329 aaKnown RBP12.39□□□□□ -0.43
CHMP3-202ENST00000393773 TMEM95Q3KNT9 176 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 CEP78Q5JTW2 689 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 LDLRAD2Q5SZI1 272 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 TMEM200BQ69YZ2 307 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 ZNF782Q6ZMW2 699 aaPredicted RBP12.39□□□□□ -0.43
CHMP3-202ENST00000393773 ACP7Q6ZNF0 438 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 SHFQ7M4L6 423 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 CD177Q8N6Q3 437 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 OTOSQ8NHW6 89 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.39□□□□□ -0.43
CHMP3-202ENST00000393773 VNN3Q9NY84 501 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 KLHDC2Q9Y2U9 406 aa12.39□□□□□ -0.43
CHMP3-202ENST00000393773 ZNF732B4DXR9 585 aa12.38□□□□□ -0.43
CHMP3-202ENST00000393773 GLCEO94923 617 aa12.38□□□□□ -0.43
CHMP3-202ENST00000393773 CEBPDP49716 269 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-202ENST00000393773 RAB13P51153 203 aa12.38□□□□□ -0.43
CHMP3-202ENST00000393773 DLX6P56179 175 aa12.38□□□□□ -0.43
CHMP3-202ENST00000393773 LGALS4P56470 323 aa12.38□□□□□ -0.43
CHMP3-202ENST00000393773 PPP1R8Q12972 351 aaKnown RBP12.38□□□□□ -0.43
CHMP3-202ENST00000393773 CEACAM21Q3KPI0 293 aa12.38□□□□□ -0.43
CHMP3-202ENST00000393773 SAMD4BQ5PRF9 694 aaKnown RBP12.38□□□□□ -0.43
CHMP3-202ENST00000393773 Q6ZS46 218 aa12.38□□□□□ -0.43
CHMP3-202ENST00000393773 POC1AQ8NBT0 407 aa12.38□□□□□ -0.43
CHMP3-202ENST00000393773 WFDC9Q8NEX5 89 aa12.38□□□□□ -0.43
CHMP3-202ENST00000393773 FOXRED1Q96CU9 486 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-202ENST00000393773 DGCR6LQ9BY27 220 aa12.38□□□□□ -0.43
CHMP3-202ENST00000393773 ARGLU1Q9NWB6 273 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-202ENST00000393773 A0A1W2PPH5 198 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 OR5B21A6NL26 309 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 RFPL4AA6NLU0 287 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 RFPL4AL1F8VTS6 287 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 SELENOFO60613 162 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 CD33P20138 364 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 ATP6V1B2P21281 511 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 SMIM21Q3B7S5 101 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 DMRTC1Q5HYR2 192 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 HAGHLQ6PII5 290 aaPredicted RBP12.37□□□□□ -0.43
CHMP3-202ENST00000393773 TRPM8Q7Z2W7 1104 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 ZNF561Q8N587 486 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 IQCF1Q8N6M8 205 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 OR4M1Q8NGD0 313 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 RPS4Y2Q8TD47 263 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 ZNF488Q96MN9 340 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 OR5M11Q96RB7 305 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 PRSS22Q9GZN4 317 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 RASL12Q9NYN1 266 aa12.37□□□□□ -0.43
CHMP3-202ENST00000393773 TBL2Q9Y4P3 447 aaKnown RBP12.37□□□□□ -0.43
CHMP3-202ENST00000393773 C17orf98A8MV24 154 aa12.36□□□□□ -0.43
CHMP3-202ENST00000393773 SLC1A7O00341 560 aa12.36□□□□□ -0.43
CHMP3-202ENST00000393773 IGLV3-1P01715 115 aa12.36□□□□□ -0.43
CHMP3-202ENST00000393773 PGA5P0DJD9 388 aa12.36□□□□□ -0.43
CHMP3-202ENST00000393773 ZNF626Q68DY1 528 aa12.36□□□□□ -0.43
CHMP3-202ENST00000393773 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-202ENST00000393773 PGAM4Q8N0Y7 254 aa12.36□□□□□ -0.43
CHMP3-202ENST00000393773 ZNF454Q8N9F8 522 aa12.36□□□□□ -0.43
CHMP3-202ENST00000393773 ZNF671Q8TAW3 534 aa12.36□□□□□ -0.43
CHMP3-202ENST00000393773 FAM81AQ8TBF8 368 aa12.36□□□□□ -0.43
CHMP3-202ENST00000393773 HIST1H2AAQ96QV6 131 aa12.36□□□□□ -0.43
CHMP3-202ENST00000393773 NIPAL2Q9H841 368 aa12.36□□□□□ -0.43
CHMP3-202ENST00000393773 TAS2R1Q9NYW7 299 aa12.36□□□□□ -0.43
CHMP3-202ENST00000393773 PITPNC1Q9UKF7 332 aa12.36□□□□□ -0.43
CHMP3-202ENST00000393773 A0A0U1RQV5 110 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 hCG_1809904A0A1W2PP81 198 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 A0A1W2PPE2 198 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 A0A1W2PR64 198 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 A0A1W2PRV1 198 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 A0A1W2PRX2 142 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 SYNGR1O43759 233 aa12.35□□□□□ -0.43
CHMP3-202ENST00000393773 ARG1P05089 322 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms