RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ACTR6Q9GZN1 396 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 HEATR1Q9H583 2144 aaKnown RBP7.43□□□□□ -1.22
TDP1-203ENST00000393454 ELF5Q9UKW6 265 aaPredicted RBP7.43□□□□□ -1.22
TDP1-203ENST00000393454 RBMX2Q9Y388 322 aaKnown RBP7.43□□□□□ -1.22
TDP1-203ENST00000393454 BSNQ9UPA5 3926 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 A0A0A6YYD4 124 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 IGHV2OR16-5A0A0B4J2B6 119 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 ZNF732B4DXR9 585 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 H7C417 338 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 SOCS1O15524 211 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 LILRA1O75019 489 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 ZNF35P13682 527 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 GNB3P16520 340 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 PSMB1P20618 241 aaKnown RBP7.42□□□□□ -1.22
TDP1-203ENST00000393454 CA6P23280 308 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 PDZK1IP1Q13113 114 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 DYRK1AQ13627 763 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 CEACAM21Q3KPI0 293 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 TMEM211Q6ICI0 200 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 FBXW12Q6X9E4 464 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 MRGPRGQ86SM5 289 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 LIX1LQ8IVB5 337 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 OR51F2Q8NH61 342 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 RND1Q92730 232 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 SEH1LQ96EE3 360 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 ZC3HAV1LQ96H79 300 aaKnown RBP7.42□□□□□ -1.22
TDP1-203ENST00000393454 C7orf50Q9BRJ6 194 aaKnown RBP7.42□□□□□ -1.22
TDP1-203ENST00000393454 MCUBQ9NWR8 336 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 MTFP1Q9UDX5 166 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 MPC1Q9Y5U8 109 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 ATRXP46100 2492 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 ANKRD20A5PA0PJZ0 165 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 PQLC2LA1A4F0 135 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 SULT1C2O00338 296 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 IGLV1-44P01699 117 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 LPLP06858 475 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 CSF1P09603 554 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 SFTPCP11686 197 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 GTF2F2P13984 249 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 GABRR1P24046 479 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 GIFP27352 417 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 HAAOP46952 286 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 CCR6P51684 374 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 ZNF260Q3ZCT1 412 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 SFRP4Q6FHJ7 346 aaPredicted RBP7.42□□□□□ -1.22
TDP1-203ENST00000393454 SLC25A26Q70HW3 274 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 CDH24Q86UP0 819 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 FJX1Q86VR8 437 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 CALHM1Q8IU99 346 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 CADM3Q8N126 398 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 BATF2Q8N1L9 274 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 ZNF611Q8N823 705 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 DUSP18Q8NEJ0 188 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 OR5A2Q8NGI9 324 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 OR8S1Q8NH09 359 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 KLF14Q8TD94 323 aaPredicted RBP7.42□□□□□ -1.22
TDP1-203ENST00000393454 GPX8Q8TED1 209 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 AQP3Q92482 292 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 CACNG6Q9BXT2 260 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 DPAGT1Q9H3H5 408 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 SCPEP1Q9HB40 452 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 MOV10Q9HCE1 1003 aaKnown RBP7.42□□□□□ -1.22
TDP1-203ENST00000393454 HRASLSQ9HDD0 168 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 TAS2R8Q9NYW2 309 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 ZZEF1O43149 2961 aa7.42□□□□□ -1.22
TDP1-203ENST00000393454 PCNX1Q96RV3 2341 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 TMEM8BA6NDV4 472 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 WIPF3A6NGB9 483 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 ICMTO60725 284 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 ZNF780AO75290 641 aaPredicted RBP7.41□□□□□ -1.22
TDP1-203ENST00000393454 CYB5AP00167 134 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 RAC2P15153 192 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 SELEP16581 610 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 BLVRBP30043 206 aaPredicted RBP7.41□□□□□ -1.22
TDP1-203ENST00000393454 SLC6A1P30531 599 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 CALCRP30988 508 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 MPV17P39210 176 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 RAB25P57735 213 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 GNG2P59768 71 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 ACTBP60709 375 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 ACTG1P63261 375 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 NAAAQ02083 359 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 PSG7Q13046 419 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 TMEM255AQ5JRV8 349 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 DNM1P46Q6ZS02 220 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 TRAPPC6BQ86SZ2 158 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 RTN4RL2Q86UN3 420 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 FAM169BQ8N8A8 192 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 NUDCD2Q8WVJ2 157 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 HPSE2Q8WWQ2 592 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 OR5P3Q8WZ94 311 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 ARHGAP5-AS1Q96IT6 56 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 VKORC1Q9BQB6 163 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 BCL2L14Q9BZR8 327 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 FGF23Q9GZV9 251 aaPredicted RBP7.41□□□□□ -1.22
TDP1-203ENST00000393454 PCDHB16Q9NRJ7 776 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 ELOVL5Q9NYP7 299 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 FZR1Q9UM11 496 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 OSGIN2Q9Y236 505 aa7.41□□□□□ -1.22
TDP1-203ENST00000393454 TRAV6A0A075B6T7 132 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms