RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 SMDT1Q9H4I9 107 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 METTL7AQ9H8H3 244 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 ZNF160Q9HCG1 818 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 FBXL17Q9UF56 701 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 AMDHD2Q9Y303 409 aa8.77□□□□□ -1.01
COL17A1-203ENST00000393211 STRAPQ9Y3F4 350 aaKnown RBP8.77□□□□□ -1.01
COL17A1-203ENST00000393211 A0A087WZY1 265 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 IGHV3-20A0A0C4DH32 117 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 STMND1H3BQB6 276 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 TSPAN15O95858 294 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 F12P00748 615 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-203ENST00000393211 SERPINA5P05154 406 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 SLC2A1P11166 492 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 NFYBP25208 207 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 OTX1P32242 354 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-203ENST00000393211 CDAP32320 146 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 CD80P33681 288 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 LTBRP36941 435 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 TMEM33P57088 247 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 ACY1Q03154 408 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 SPEM2Q0P670 501 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 MFAP5Q13361 173 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 GGNBP1Q5YKI7 109 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 PLXDC2Q6UX71 529 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 C16orf47Q6ZP98 133 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-203ENST00000393211 FADS6Q8N9I5 356 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 SLC38A9Q8NBW4 561 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 LILRB1Q8NHL6 650 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-203ENST00000393211 TMEM54Q969K7 222 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 RELTQ969Z4 430 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 SPSB1Q96BD6 273 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 INTS12Q96CB8 462 aaKnown RBP8.76□□□□□ -1.01
COL17A1-203ENST00000393211 LYZL4Q96KX0 146 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 CMSS1Q9BQ75 279 aaKnown RBP8.76□□□□□ -1.01
COL17A1-203ENST00000393211 GINS3Q9BRX5 216 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 ZNF2Q9BSG1 426 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-203ENST00000393211 SUCNR1Q9BXA5 334 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 SLC7A5P2Q9GIP4 190 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 NELFAQ9H3P2 528 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 LUZP4Q9P127 313 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 ANXA10Q9UJ72 324 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 PADI1Q9ULC6 663 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 ADAMTS20P59510 1910 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 A0A1B0GW64 132 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 C2CD4DB7Z1M9 353 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 UBE2CO00762 179 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 GPR137BO60478 399 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 VAMP5O95183 116 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 KNG1P01042 644 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 DANCRP0C864 163 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 FCGR2AP12318 317 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 RCC1P18754 421 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-203ENST00000393211 SNCAP37840 140 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 KCNJ3P48549 501 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 HABP2Q14520 560 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-203ENST00000393211 IL13RA2Q14627 380 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 NKAIN1Q4KMZ8 207 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 OR2A2Q6IF42 318 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 C1QL2Q7Z5L3 287 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 LFNGQ8NES3 379 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 POM121Q96HA1 1249 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 Q96M66 194 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 WDR77Q9BQA1 342 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-203ENST00000393211 ANGPTL4Q9BY76 406 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 NECAP2Q9NVZ3 263 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 PLEKHJ1Q9NW61 149 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 PRR13Q9NZ81 148 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 MYOTQ9UBF9 498 aa8.76□□□□□ -1.01
COL17A1-203ENST00000393211 C19orf25Q9UFG5 118 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-203ENST00000393211 ATXN7L1Q9ULK2 861 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-203ENST00000393211 C5orf52A6NGY3 159 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 SHISA8B8ZZ34 492 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 H7C1Q1 480 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 EIF1BO60739 113 aaKnown RBP8.75□□□□□ -1.01
COL17A1-203ENST00000393211 GLAP06280 429 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 S100A9P06702 114 aaKnown RBP8.75□□□□□ -1.01
COL17A1-203ENST00000393211 SERPINA2P20848 420 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 AGAP20933 346 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 P2RY1P47900 373 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 CSNK1A1P48729 337 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 UCP3P55916 312 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 RAB1AP62820 205 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 H3F3AP84243 136 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 UBE2V2Q15819 145 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 CARD17Q5XLA6 110 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 RPUSD3Q6P087 351 aaKnown RBP8.75□□□□□ -1.01
COL17A1-203ENST00000393211 ASCL4Q6XD76 172 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 CPEB2Q7Z5Q1 589 aaKnown RBP8.75□□□□□ -1.01
COL17A1-203ENST00000393211 THAP3Q8WTV1 239 aaPredicted RBP8.75□□□□□ -1.01
COL17A1-203ENST00000393211 SPTSSAQ969W0 71 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 HIST1H2BAQ96A08 127 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 MALSU1Q96EH3 234 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 PIGQQ9BRB3 760 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 PBDC1Q9BVG4 233 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 TPSD1Q9BZJ3 242 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 METTL9Q9H1A3 318 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 NAA60Q9H7X0 242 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 ZNF701Q9NV72 531 aaPredicted RBP8.75□□□□□ -1.01
COL17A1-203ENST00000393211 PLA2G2EQ9NZK7 142 aa8.75□□□□□ -1.01
COL17A1-203ENST00000393211 FER1L5A0AVI2 2057 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms