RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 ZNF141Q15928 474 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 SMIM21Q3B7S5 101 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 MOGAT1Q96PD6 335 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 TRIB1Q96RU8 372 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 MIXL1Q9H2W2 232 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 TMPRSS5Q9H3S3 457 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 PROCRQ9UNN8 238 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 FAM96BQ9Y3D0 163 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 CRYM-AS1A6NIL9 109 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 H3BMH7 237 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 CLDN34H7C241 214 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 ZNF17P17021 662 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 ASCL1P50553 236 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 BPIFB3P59826 476 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 GNG3P63215 75 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 MRM1Q6IN84 353 aaKnown RBP11.72□□□□□ -0.53
LCA5-202ENST00000392959 TSEN54Q7Z6J9 526 aaKnown RBP11.72□□□□□ -0.53
LCA5-202ENST00000392959 SPEM1Q8N4L4 309 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 PIK3IP1Q96FE7 263 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 FAM173AQ9BQD7 235 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 ZNF391Q9UJN7 358 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 ONECUT2O95948 504 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 LIMK1P53667 647 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 RPS16P62249 146 aaKnown RBP11.72□□□□□ -0.53
LCA5-202ENST00000392959 PDCD1Q15116 288 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 SLC35B3Q9H1N7 401 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 LOXL2Q9Y4K0 774 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 SSC5DA1L4H1 1573 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 RGS13O14921 159 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 MYF5P13349 255 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 CXCL3P19876 107 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 SNRPEP62304 92 aaKnown RBP11.72□□□□□ -0.53
LCA5-202ENST00000392959 PRDX4Q13162 271 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 ZNF66Q6ZN08 573 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 C20orf196Q8IYI0 205 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 C10orf111Q8N326 155 aa11.72□□□□□ -0.53
LCA5-202ENST00000392959 NXF2Q9GZY0 626 aaKnown RBP11.72□□□□□ -0.53
LCA5-202ENST00000392959 GPR37O15354 613 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 OGG1O15527 345 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 MBTPS2O43462 519 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 RAB5AP20339 215 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 SELENOPP49908 381 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 SUMO1P63165 101 aaKnown RBP11.71□□□□□ -0.53
LCA5-202ENST00000392959 C6orf201Q7Z4U5 140 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 FAAP24Q9BTP7 215 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 CHRDL1Q9BU40 450 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 UBE2ZQ9H832 354 aaPredicted RBP11.71□□□□□ -0.53
LCA5-202ENST00000392959 MRM2Q9UI43 246 aaKnown RBP11.71□□□□□ -0.53
LCA5-202ENST00000392959 KIAA1551Q9HCM1 1747 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 CTDSPLO15194 276 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 PLA2G10O15496 165 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 HSBP1O75506 76 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 CT62P0C5K7 136 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 ZIC1Q15915 447 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 SPATA46Q5T0L3 261 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 DGAT2L6Q6ZPD8 337 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 FAM24BQ8N5W8 94 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 CNTD2Q9H8S5 307 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 UCK1Q9HA47 277 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 UQCC1Q9NVA1 299 aa11.71□□□□□ -0.53
LCA5-202ENST00000392959 SLC22A20A6NK97 555 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 GSTZ1O43708 216 aaPredicted RBP11.71□□□□□ -0.54
LCA5-202ENST00000392959 B3GALNT1O75752 331 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 IGHA1P01876 353 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 PPP1CBP62140 327 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 GGNBP1Q5YKI7 109 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 PRR27Q6MZM9 219 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 KLHDC1Q8N7A1 406 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 OR4D11Q8NGI4 311 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 TMEM37Q8WXS4 190 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 RAB40CQ96S21 281 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 FBXL17Q9UF56 701 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 PRRG2O14669 202 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 GABRA1P14867 456 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 KRTDAPP60985 99 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 GNB1P62873 340 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 RPL11P62913 178 aaKnown RBP11.71□□□□□ -0.54
LCA5-202ENST00000392959 RNF151Q2KHN1 245 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 Q6ZS52 159 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 OR4D9Q8NGE8 314 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 OR10D4PQ8NGN7 298 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 CLDN23Q96B33 292 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 TIMD4Q96H15 378 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 COX14Q96I36 57 aa11.71□□□□□ -0.54
LCA5-202ENST00000392959 ADAMTSL3P82987 1691 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 WIPI1Q5MNZ9 446 aaPredicted RBP11.7□□□□□ -0.54
LCA5-202ENST00000392959 MRGPREQ86SM8 312 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 OR2C3Q8N628 320 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 GVQW1Q8N7I0 195 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 UBALD1Q8TB05 177 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 GPR137Q96N19 417 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 GNRHR2Q96P88 292 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 ERRFI1Q9UJM3 462 aaPredicted RBP11.7□□□□□ -0.54
LCA5-202ENST00000392959 IGHV5-51A0A0C4DH38 117 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 TMEM30CPA0ZSE6 113 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 NPIPB8E9PQR5 432 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 PIAS2O75928 621 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 IRF3Q14653 427 aa11.7□□□□□ -0.54
LCA5-202ENST00000392959 SCMH1Q96GD3 660 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms