RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 TVP23CQ96ET8 276 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 NICN1Q9BSH3 213 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 MRPL22Q9NWU5 206 aaKnown RBP12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 SUSD2Q9UGT4 822 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 LRP12Q9Y561 859 aa12.95□□□□□ -0.34
VPS9D1-201ENST00000389386 PRSS38A1L453 326 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 TOX3O15405 576 aaPredicted RBP12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 GUSBP08236 651 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 RND3P61587 244 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 KCTD18Q6PI47 426 aaPredicted RBP12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 TMEM183AQ8IXX5 376 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 OR52N4Q8NGI2 321 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 OR5H2Q8NGV7 314 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 FNDC9Q8TBE3 224 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 PATE1Q8WXA2 126 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 C1orf123Q9NWV4 160 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 EMC9Q9Y3B6 208 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 FTCDNL1E5RQL4 147 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 FOXS1O43638 330 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 SRSF10O75494 262 aaKnown RBP12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 CHRM2P08172 466 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 PTGER4P35408 488 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 CEBPGP53567 150 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 ZNF117Q03924 483 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 ZNF542PQ5EBM4 170 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 ABLIM2Q6H8Q1 611 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 DGAT2L6Q6ZPD8 337 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 CYYR1Q96J86 154 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 TMEM208Q9BTX3 173 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 ABHD6Q9BV23 337 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 GPR87Q9BY21 358 aa12.94□□□□□ -0.34
VPS9D1-201ENST00000389386 A0A0A6YYD4 124 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 DLEU1O43261 78 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 TGOLN2O43493 480 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 CRYABP02511 175 aaKnown RBP12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 ISG15P05161 165 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 HSD11B1P28845 292 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 CTHP32929 405 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 TDGF1P3P51864 188 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 EMP2P54851 167 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 RPS15AP62244 130 aaKnown RBP12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 INSM1Q01101 510 aaPredicted RBP12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 PLAC9Q5JTB6 97 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 PLXDC2Q6UX71 529 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 TMEM182Q6ZP80 229 aaPredicted RBP12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 PRSS58Q8IYP2 241 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 PLPP5Q8NEB5 264 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 SHDQ96IW2 340 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 TIMM29Q9BSF4 260 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 UBE2ZQ9H832 354 aaPredicted RBP12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 B3GALT5Q9Y2C3 310 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 WDR87Q6ZQQ6 2873 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 ZNF705GA8MUZ8 300 aaPredicted RBP12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 TMEM14DPA8MWL7 114 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 E5RGE8 158 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 M0R143 59 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 GSTP1P09211 210 aaKnown RBP12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 SLC35G6P0C7Q6 338 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 RBMXP38159 391 aaKnown RBP12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 RGS19P49795 217 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 EGR4Q05215 589 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 FBXO42Q6P3S6 717 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 SPSB3Q6PJ21 355 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 COX15Q7KZN9 410 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 ATG4DQ86TL0 474 aaPredicted RBP12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 OR10G6Q8NH81 332 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 POC1BQ8TC44 478 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 EMG1Q92979 244 aaKnown RBP12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 ADGRG7Q96K78 797 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 G6PC2Q9NQR9 355 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 LRIT1Q9P2V4 623 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 FBLN5Q9UBX5 448 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 NSG2Q9Y328 171 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 R4GMQ9 66 aa12.93□□□□□ -0.34
VPS9D1-201ENST00000389386 VPS13AQ96RL7 3174 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 SERINC4A6NH21 518 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 CDRT15L2A8MXV6 281 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 SDCBPO00560 298 aaPredicted RBP12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 RAD51DO75771 328 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 GIMD1P0DJR0 217 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 PNLIPP16233 465 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 RAB35Q15286 201 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 SLC35E3Q7Z769 313 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 SGPP2Q8IWX5 399 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 OR4C3Q8NH37 302 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 FGGYQ96C11 551 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 TM4SF19Q96DZ7 209 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 ZPBPQ9BS86 351 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 LMF2Q9BU23 707 aaKnown RBP12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 LPAR5Q9H1C0 372 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 SLC5A6Q9Y289 635 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 GEMIN2O14893 280 aaKnown RBP12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 GPR137BO60478 399 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 OR6A2O95222 327 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 SCGB1D2O95969 90 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 KNG1P01042 644 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 GCGP01275 180 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 TMEM92Q6UXU6 159 aa12.92□□□□□ -0.34
VPS9D1-201ENST00000389386 C1orf87Q8N0U7 546 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms