RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 SOX15O60248 233 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 GPR137BO60478 399 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 RNH1P13489 461 aaKnown RBP13.2□□□□□ -0.3
CTNS-202ENST00000381870 FOXK1P85037 733 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 GLO1Q04760 184 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 DMRTC1Q5HYR2 192 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 SPSB3Q6PJ21 355 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.2□□□□□ -0.3
CTNS-202ENST00000381870 RTN4RQ9BZR6 473 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 FBLN5Q9UBX5 448 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 A0A1W2PP55 124 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 CRTAPO75718 401 aaPredicted RBP13.2□□□□□ -0.3
CTNS-202ENST00000381870 H2BFMP0C1H6 154 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 KIR2DS3Q14952 304 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 SP6Q3SY56 376 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 TMEM176BQ3YBM2 270 aaPredicted RBP13.2□□□□□ -0.3
CTNS-202ENST00000381870 CDCP2Q5VXM1 449 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 RD3Q7Z3Z2 195 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 ZFP62Q8NB50 900 aaPredicted RBP13.2□□□□□ -0.3
CTNS-202ENST00000381870 OR5D14Q8NGL3 314 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 TVP23CQ96ET8 276 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 REEP6Q96HR9 211 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 TMEM59Q9BXS4 323 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 OR10A5Q9H207 317 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 SIRT7Q9NRC8 400 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 DEC1Q9P2X7 70 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 COL4A2P08572 1712 aa13.2□□□□□ -0.3
CTNS-202ENST00000381870 CCDC187A0A096LP49 1063 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 ZNF705GA8MUZ8 300 aaPredicted RBP13.19□□□□□ -0.3
CTNS-202ENST00000381870 ZNF823P16415 610 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 VIPR2P41587 438 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 MNX1P50219 401 aaPredicted RBP13.19□□□□□ -0.3
CTNS-202ENST00000381870 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTNS-202ENST00000381870 SLC22A25Q6T423 547 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 BEND2Q8NDZ0 799 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 C5orf34Q96MH7 638 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 TXNIPQ9H3M7 391 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 SMDT1Q9H4I9 107 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 FAM206AQ9NX38 181 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 MUC22E2RYF6 1773 aaPredicted RBP13.19□□□□□ -0.3
CTNS-202ENST00000381870 IGKV1D-8A0A087WSZ0 117 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 CXCL10P02778 98 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 HLA-DOBP13765 273 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 CD200P41217 278 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 GPR3P46089 330 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 SULF2Q8IWU5 870 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 METTL9Q9H1A3 318 aa13.19□□□□□ -0.3
CTNS-202ENST00000381870 FTCDNL1E5RQL4 147 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 SCDO00767 359 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 AMBPP02760 352 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 TAS2R46P59540 309 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 DEFB103AP81534 67 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 ICAM4Q14773 271 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 GAB4Q2WGN9 574 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 CHRFAM7AQ494W8 412 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 LANCL3Q6ZV70 420 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 SLC26A10Q8NG04 563 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 NIPSNAP3BQ9BS92 247 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 ZNF2Q9BSG1 426 aaPredicted RBP13.18□□□□□ -0.3
CTNS-202ENST00000381870 SNHG12Q9BXW3 62 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 PIAS3Q9Y6X2 628 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 TRAV36DV7A0A075B6V5 113 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 DVL1O14640 695 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 SCAF4O95104 1147 aaKnown RBP13.18□□□□□ -0.3
CTNS-202ENST00000381870 FUT3P21217 361 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 DEFB110Q30KQ9 67 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 WDFY1Q8IWB7 410 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 PLPP5Q8NEB5 264 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 OR2G3Q8NGZ4 309 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 KCNG3Q8TAE7 436 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 DAZLQ92904 295 aaKnown RBP13.18□□□□□ -0.3
CTNS-202ENST00000381870 CDCA3Q99618 268 aaPredicted RBP13.18□□□□□ -0.3
CTNS-202ENST00000381870 PBOV1Q9GZY1 135 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 ZNF700Q9H0M5 742 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 CYP8B1Q9UNU6 501 aa13.18□□□□□ -0.3
CTNS-202ENST00000381870 NSG1A0A0A6YYJ2 146 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 IGKV1D-43A0A0B4J1Z2 117 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 CRYM-AS1A6NIL9 109 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 MBP02144 154 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 GLI4P10075 376 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 EN2P19622 333 aaPredicted RBP13.17□□□□□ -0.3
CTNS-202ENST00000381870 MMP16P51512 607 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 SEC13P55735 322 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 SGCGQ13326 291 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 SGCBQ16585 318 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 OR5AS1Q8N127 324 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 OR52M1Q8NGK5 317 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 APOOQ9BUR5 198 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 GPR87Q9BY21 358 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 WSB1Q9Y6I7 421 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 MYO7AQ13402 2215 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 HIDE1A8MVS5 230 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 ZNF878C9JN71 531 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 UTS2O95399 124 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 ZNF25P17030 456 aaPredicted RBP13.17□□□□□ -0.3
CTNS-202ENST00000381870 SLC10A1Q14973 349 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 GPR157Q5UAW9 335 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 LYZL2Q7Z4W2 148 aa13.17□□□□□ -0.3
CTNS-202ENST00000381870 GRASPQ7Z6J2 395 aaPredicted RBP13.17□□□□□ -0.3
CTNS-202ENST00000381870 C1orf87Q8N0U7 546 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms