RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 SNIP1Q8TAD8 396 aaKnown RBP16.9■□□□□ 0.3
SSU72-204ENST00000378726 SEH1LQ96EE3 360 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 UQCC2Q9BRT2 126 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 V9GYS6 101 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 FRYQ5TBA9 3013 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 NUPL2O15504 423 aaKnown RBP16.9■□□□□ 0.3
SSU72-204ENST00000378726 OR4E1P0C645 316 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 AGTR1P30556 359 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 ZNF93P35789 620 aaPredicted RBP16.9■□□□□ 0.3
SSU72-204ENST00000378726 ZNF273Q14593 569 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 ZNF169Q14929 603 aaPredicted RBP16.9■□□□□ 0.3
SSU72-204ENST00000378726 KRTAP27-1Q3LI81 207 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 PABPC1L2AQ5JQF8 200 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 OR10K2Q6IF99 312 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 IGFL3Q6UXB1 125 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 P4HA3Q7Z4N8 544 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 HSD17B13Q7Z5P4 300 aaPredicted RBP16.9■□□□□ 0.3
SSU72-204ENST00000378726 TINAGL1Q9GZM7 467 aaPredicted RBP16.9■□□□□ 0.3
SSU72-204ENST00000378726 PRSS50Q9UI38 385 aa16.9■□□□□ 0.3
SSU72-204ENST00000378726 H3BUI4 141 aa16.89■□□□□ 0.29
SSU72-204ENST00000378726 ZNF627Q7L945 461 aa16.89■□□□□ 0.29
SSU72-204ENST00000378726 TMED4Q7Z7H5 227 aa16.89■□□□□ 0.29
SSU72-204ENST00000378726 OR5AS1Q8N127 324 aa16.89■□□□□ 0.29
SSU72-204ENST00000378726 SPACA5Q96QH8 159 aa16.89■□□□□ 0.29
SSU72-204ENST00000378726 ALX4Q9H161 411 aaPredicted RBP16.89■□□□□ 0.29
SSU72-204ENST00000378726 GP6Q9HCN6 339 aa16.89■□□□□ 0.29
SSU72-204ENST00000378726 AQP7O14520 342 aa16.89■□□□□ 0.29
SSU72-204ENST00000378726 LDLRAD4O15165 306 aa16.89■□□□□ 0.29
SSU72-204ENST00000378726 RAB3DO95716 219 aa16.89■□□□□ 0.29
SSU72-204ENST00000378726 FCGR2AP12318 317 aa16.89■□□□□ 0.29
SSU72-204ENST00000378726 TAS2R19P59542 299 aa16.89■□□□□ 0.29
SSU72-204ENST00000378726 RNF144BQ7Z419 303 aa16.89■□□□□ 0.29
SSU72-204ENST00000378726 ADGRE4PQ86SQ3 457 aa16.89■□□□□ 0.29
SSU72-204ENST00000378726 C12orf45Q8N5I9 185 aaPredicted RBP16.89■□□□□ 0.29
SSU72-204ENST00000378726 CPEB3Q8NE35 698 aaKnown RBP16.89■□□□□ 0.29
SSU72-204ENST00000378726 OR10Z1Q8NGY1 313 aa16.89■□□□□ 0.29
SSU72-204ENST00000378726 MRPS24Q96EL2 167 aaKnown RBP16.89■□□□□ 0.29
SSU72-204ENST00000378726 TMEM82A0PJX8 343 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 ATRAIDQ6UW56 229 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 Q6ZSR3 168 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 ANGPTL5Q86XS5 388 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 TMEM229BQ8NBD8 167 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 OR2AE1Q8NHA4 323 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 TAAR6Q96RI8 345 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 SCNM1Q9BWG6 230 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 FBXO9Q9UK97 447 aaPredicted RBP16.88■□□□□ 0.29
SSU72-204ENST00000378726 PIGLQ9Y2B2 252 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 DCHS1Q96JQ0 3298 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 IGKV1-9A0A0C4DH69 117 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 GFRA3O60609 400 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 HLA-HP01893 362 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 HCKP08631 526 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 CAPZA1P52907 286 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 ACTBP60709 375 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 ACTG1P63261 375 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 CTAG1AP78358 180 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 SSBP1Q04837 148 aaKnown RBP16.88■□□□□ 0.29
SSU72-204ENST00000378726 DMRTC1Q5HYR2 192 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 CCDC54Q8NEL0 328 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 STEAP2Q8NFT2 490 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 FBXW5Q969U6 566 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 REEP6Q96HR9 211 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 TRIB1Q96RU8 372 aa16.88■□□□□ 0.29
SSU72-204ENST00000378726 ZMAT3Q9HA38 289 aaKnown RBP16.88■□□□□ 0.29
SSU72-204ENST00000378726 SIGLEC5O15389 551 aa16.87■□□□□ 0.29
SSU72-204ENST00000378726 NDUFA2O43678 99 aa16.87■□□□□ 0.29
SSU72-204ENST00000378726 MELTFP08582 738 aa16.87■□□□□ 0.29
SSU72-204ENST00000378726 FAHP16930 419 aa16.87■□□□□ 0.29
SSU72-204ENST00000378726 THBS4P35443 961 aa16.87■□□□□ 0.29
SSU72-204ENST00000378726 ZMYND11Q15326 602 aa16.87■□□□□ 0.29
SSU72-204ENST00000378726 FBXW9Q5XUX1 488 aa16.87■□□□□ 0.29
SSU72-204ENST00000378726 ZNF546Q86UE3 836 aa16.87■□□□□ 0.29
SSU72-204ENST00000378726 EIF4E3Q8N5X7 224 aaKnown RBP16.87■□□□□ 0.29
SSU72-204ENST00000378726 CCDC107Q8WV48 283 aa16.87■□□□□ 0.29
SSU72-204ENST00000378726 PTX4Q96A99 478 aa16.87■□□□□ 0.29
SSU72-204ENST00000378726 SARAFQ96BY9 339 aa16.87■□□□□ 0.29
SSU72-204ENST00000378726 GMPPAQ96IJ6 420 aaPredicted RBP16.87■□□□□ 0.29
SSU72-204ENST00000378726 AMY2AP04746 511 aa16.86■□□□□ 0.29
SSU72-204ENST00000378726 ZNF735P0CB33 412 aa16.86■□□□□ 0.29
SSU72-204ENST00000378726 FAM74A1Q5RGS3 127 aa16.86■□□□□ 0.29
SSU72-204ENST00000378726 C17orf107Q6ZR85 190 aa16.86■□□□□ 0.29
SSU72-204ENST00000378726 ST8SIA2Q92186 375 aa16.86■□□□□ 0.29
SSU72-204ENST00000378726 CLCF1Q9UBD9 225 aa16.86■□□□□ 0.29
SSU72-204ENST00000378726 RAB22AQ9UL26 194 aa16.86■□□□□ 0.29
SSU72-204ENST00000378726 UBE2V2Q15819 145 aa16.86■□□□□ 0.29
SSU72-204ENST00000378726 MOGAT2Q3SYC2 334 aa16.86■□□□□ 0.29
SSU72-204ENST00000378726 ATPAF1Q5TC12 328 aaPredicted RBP16.86■□□□□ 0.29
SSU72-204ENST00000378726 AWAT2Q6E213 333 aa16.86■□□□□ 0.29
SSU72-204ENST00000378726 PAQR4Q8N4S7 273 aaPredicted RBP16.86■□□□□ 0.29
SSU72-204ENST00000378726 PXT1Q8NFP0 134 aa16.86■□□□□ 0.29
SSU72-204ENST00000378726 SEMA6DQ8NFY4 1073 aa16.86■□□□□ 0.29
SSU72-204ENST00000378726 PP6455Q8WZ26 134 aa16.86■□□□□ 0.29
SSU72-204ENST00000378726 C10orf35Q96D05 121 aa16.86■□□□□ 0.29
SSU72-204ENST00000378726 TNRC6AQ8NDV7 1962 aaKnown RBP16.86■□□□□ 0.29
SSU72-204ENST00000378726 SULT1C2O00338 296 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 BPNT1O95861 308 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 CD79AP11912 226 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 RAB6AP20340 208 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 ASB13Q8WXK3 278 aa16.85■□□□□ 0.29
SSU72-204ENST00000378726 GPER1Q99527 375 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms