RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 ZNF671Q8TAW3 534 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 TRMT10AQ8TBZ6 339 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 NPRL2Q8WTW4 380 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 ZFAND2BQ8WV99 257 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 RORBQ92753 470 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 GCDHQ92947 438 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 DACT3Q96B18 629 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 TMIGD2Q96BF3 282 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 UPRTQ96BW1 309 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 ESM1Q9NQ30 184 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 NLKQ9UBE8 527 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 SOX21Q9Y651 276 aaPredicted RBP9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 V9GYS6 101 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 DOCK11Q5JSL3 2073 aa9.59□□□□□ -0.87
SMARCE1-203ENST00000377808 MDFIC2A0A1B0GVS7 189 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 FAM230AA0A1W2PPH8 454 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 ZNF879B4DU55 563 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 SULT1C4O75897 302 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 ECDO95905 644 aaPredicted RBP9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 LIPFP07098 398 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 PPIAL4GP0DN37 164 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 SELLP14151 372 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 CAPZA1P52907 286 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 UBA52P62987 128 aaKnown RBP9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 ACTC1P68032 377 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 ACTA1P68133 377 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 FAM76BQ5HYJ3 339 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 RUSC1-AS1Q66K80 236 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 PDZD9Q8IXQ8 264 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 ZDHHC22Q8N966 263 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 OR14K1Q8NGZ2 314 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 ZDHHC16Q969W1 377 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 ZNF488Q96MN9 340 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 WDFY2Q96P53 400 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 SLC29A1Q99808 456 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 KAAG1Q9UBP8 84 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 SLC7A11Q9UPY5 501 aa9.58□□□□□ -0.88
SMARCE1-203ENST00000377808 A0A1B0GTI1 187 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 LOC107986453A0A1B0GWG9 222 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 ANKRD61A6NGH8 418 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 DNAJC9-AS1A6NH13 148 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 OR2AT4A6NND4 320 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 J3QLW9 94 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 DLGAP1O14490 977 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 SYNGR1O43759 233 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 FCN3O75636 299 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 PLATP00750 562 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 ZNF19P17023 458 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 SNRPGP62308 76 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 IL13RA1P78552 427 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 OCLNQ16625 522 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 ZSCAN26Q16670 478 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 ZNF573Q86YE8 665 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 RDH10Q8IZV5 341 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 PRSS35Q8N3Z0 413 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 ZNF555Q8NEP9 628 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 TMEM185AQ8NFB2 350 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 FAM216AQ8WUB2 273 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 AQP3Q92482 292 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 LHX4Q969G2 390 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 ITFG2Q969R8 447 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 ZNF48Q96MX3 618 aaPredicted RBP9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 GAFA1Q96PS6 74 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 CNTD2Q9H8S5 307 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 TNFRSF19Q9NS68 423 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 SLC25A10Q9UBX3 287 aaPredicted RBP9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 RPUSD1Q9UJJ7 312 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 POLDIP2Q9Y2S7 368 aa9.57□□□□□ -0.88
SMARCE1-203ENST00000377808 LOC100130705A0A1B0GUX0 176 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 A0A1W2PQ09 198 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 J3QT63 122 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 MPZL2O60487 215 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 GATBO75879 557 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 INMTO95050 263 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 NXPH2O95156 264 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 SERPINA3P01011 423 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 HTR1AP08908 422 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 OCM2P0CE71 109 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 OCMP0CE72 109 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 UBCP0CG48 685 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ZNF20P17024 532 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 CCL1P22362 96 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 OR12D2P58182 307 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ZNF91Q05481 1191 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 DGUOKQ16854 277 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 LRRC36Q1X8D7 754 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 SMIM21Q3B7S5 101 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 VMO1Q7Z5L0 202 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ANGPTL5Q86XS5 388 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ENTHD1Q8IYW4 607 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 CMTM4Q8IZR5 234 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ANGPTL6Q8NI99 470 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 GATAD2BQ8WXI9 593 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 LGALS12Q96DT0 336 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 MRPL48Q96GC5 212 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 MED30Q96HR3 178 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 Q96MT0 163 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 TBX15Q96SF7 602 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 DNTTIP1Q9H147 329 aa9.56□□□□□ -0.88
SMARCE1-203ENST00000377808 ELL3Q9HB65 397 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms