RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 ARRDC5A6NEK1 342 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 PPIHO43447 177 aaKnown RBP11.25□□□□□ -0.61
VPS13A-204ENST00000376634 ADPRHL1Q8NDY3 354 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 NUDCD2Q8WVJ2 157 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 OR5V1Q9UGF6 321 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 PPT2Q9UMR5 302 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 A6NDN8 102 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 JUNBP17275 347 aaPredicted RBP11.25□□□□□ -0.61
VPS13A-204ENST00000376634 C16orf52Q8NHV5 167 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 RHOFQ9HBH0 211 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 FREM1Q5H8C1 2179 aa11.25□□□□□ -0.61
VPS13A-204ENST00000376634 CDK2AP1O14519 115 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 IGFBP7Q16270 282 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 ALKAL1Q6UXT8 129 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 Q6ZN92 141 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 TEX37Q96LM6 180 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 ADAT1Q9BUB4 502 aaKnown RBP11.24□□□□□ -0.61
VPS13A-204ENST00000376634 ACER3Q9NUN7 267 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 POLR2IP36954 125 aaKnown RBP11.24□□□□□ -0.61
VPS13A-204ENST00000376634 SOWAHCQ53LP3 525 aaPredicted RBP11.24□□□□□ -0.61
VPS13A-204ENST00000376634 TCTEX1D1Q8N7M0 179 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 WASHC3Q9Y3C0 194 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 TRAV34A0A0B4J273 112 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 SLC25A5P05141 298 aaKnown RBP11.24□□□□□ -0.61
VPS13A-204ENST00000376634 SCGB1A1P11684 91 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 RNPS1Q15287 305 aaKnown RBP11.24□□□□□ -0.61
VPS13A-204ENST00000376634 ZNF66Q6ZN08 573 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 MAVSQ7Z434 540 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 ALKBH3Q96Q83 286 aaPredicted RBP11.24□□□□□ -0.61
VPS13A-204ENST00000376634 ZBP1Q9H171 429 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 GYPAP02724 150 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 KCNJ3P48549 501 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 C8orf44Q96CB5 159 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 SEC11CQ9BY50 192 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 A0A1B0GTQ1 180 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 FRG2CA6NGY1 282 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 ONECUT2O95948 504 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 GPX2P18283 190 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 RPL24P83731 157 aaKnown RBP11.24□□□□□ -0.61
VPS13A-204ENST00000376634 RFLNAQ6ZTI6 216 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 CALHM3Q86XJ0 350 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 PLPP6Q8IY26 295 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 NEURL1O76050 574 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 MDH2P40926 338 aaKnown RBP11.24□□□□□ -0.61
VPS13A-204ENST00000376634 C21orf58P58505 322 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 FAAP20Q6NZ36 180 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 NOXO1Q8NFA2 376 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 SLC26A10Q8NG04 563 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 NARFLQ9H6Q4 476 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 ACP1P24666 158 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 CD200P41217 278 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 ZNF680Q8NEM1 530 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 TAAR9Q96RI9 348 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 IFT22Q9H7X7 185 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 MYOZ1Q9NP98 299 aaPredicted RBP11.24□□□□□ -0.61
VPS13A-204ENST00000376634 A0A1W2PR48 441 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 NDUFB3O43676 98 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 PRRX1P54821 245 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 FAM3AP98173 230 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 ELFN2Q5R3F8 820 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 TMEM102Q8N9M5 508 aaPredicted RBP11.24□□□□□ -0.61
VPS13A-204ENST00000376634 RPEQ96AT9 228 aa11.24□□□□□ -0.61
VPS13A-204ENST00000376634 PI3P19957 117 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 PMP22Q01453 160 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 MIDNQ504T8 468 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 STAC2Q6ZMT1 411 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 SFTPA2Q8IWL1 248 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 SFTPA1Q8IWL2 248 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 OR1F12Q8NHA8 337 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 RTN4IP1Q8WWV3 396 aaPredicted RBP11.23□□□□□ -0.61
VPS13A-204ENST00000376634 SCGB1D4Q6XE38 83 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 MS4A10Q96PG2 267 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 CYR61O00622 381 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 FAHP16930 419 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 AQP6Q13520 282 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 DGAT2L7PQ6IED9 249 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 NPEPL1Q8NDH3 523 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 OR6S1Q8NH40 331 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 SPACA9Q96E40 222 aaPredicted RBP11.23□□□□□ -0.61
VPS13A-204ENST00000376634 KRASP01116 189 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 DIO1P49895 249 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 CLDN15P56746 228 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 TGIF2LXQ8IUE1 241 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 ETFBKMTQ8IXQ9 262 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 FAM26EQ8N5C1 309 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 BAHD1Q8TBE0 780 aaPredicted RBP11.23□□□□□ -0.61
VPS13A-204ENST00000376634 LINC01387J3KSC0 135 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 NQO2P16083 231 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 ARRB2P32121 409 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 DPTQ07507 201 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 TRAT1Q6PIZ9 186 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 MYPOPQ86VE0 399 aaPredicted RBP11.23□□□□□ -0.61
VPS13A-204ENST00000376634 CA5BP1Q8WTZ4 195 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 KCNK15Q9H427 330 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 HCSTQ9UBK5 93 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 SLC2A10O95528 541 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 GP2P55259 537 aaKnown RBP11.23□□□□□ -0.61
VPS13A-204ENST00000376634 HERVK_113P61574 105 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 PLA1AQ53H76 456 aa11.23□□□□□ -0.61
VPS13A-204ENST00000376634 LINC00299Q6ZSB3 139 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms