RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ERVFRD-1P60508 538 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 SSPNQ14714 243 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 LINC01590Q5TEZ4 76 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 POC1AQ8NBT0 407 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 THAP3Q8WTV1 239 aaPredicted RBP10.76□□□□□ -0.69
C9orf3-203ENST00000375315 SMIM3Q9BZL3 60 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 OR11A1Q9GZK7 315 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 OR8D2Q9GZM6 311 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 ASCL3Q9NQ33 180 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 PRTFDC1Q9NRG1 225 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 KLHDC2Q9Y2U9 406 aa10.76□□□□□ -0.69
C9orf3-203ENST00000375315 BORCS7-ASMTA0A0B4J1R7 106 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 A0A1B0GW64 132 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 TGFBR3LH3BV60 316 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 M0QZK8 103 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 CYR61O00622 381 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 PEX12O00623 359 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 GGCTO75223 188 aaKnown RBP10.75□□□□□ -0.69
C9orf3-203ENST00000375315 GPR75O95800 540 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 GCGP01275 180 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 NPSP0C0P6 89 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 SMIM10L1P0DMW3 83 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 GABRR1P24046 479 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 APLNRP35414 380 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 THBS4P35443 961 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 THNSL2Q86YJ6 484 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 ZNF283Q8N7M2 679 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 ZPLD1Q8TCW7 415 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 ABHD5Q8WTS1 349 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 SMIM10Q96HG1 83 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 DCBLD2Q96PD2 775 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 OR6C1Q96RD1 312 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 NKX3-1Q99801 234 aaPredicted RBP10.75□□□□□ -0.69
C9orf3-203ENST00000375315 SDK2Q58EX2 2172 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 A0A0B4J2E0 115 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 A0A1B0GWA3 101 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 A0A1B0GX12 115 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 A0A1W2PQM1 296 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 LILRA5A6NI73 299 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 ARPC3O15145 178 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 RPLP1P05386 114 aaKnown RBP10.75□□□□□ -0.69
C9orf3-203ENST00000375315 OGFOD3Q6PK18 319 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 CLEC18BQ6UXF7 455 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 HOGA1Q86XE5 327 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 GVQW1Q8N7I0 195 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 TMEM104Q8NE00 496 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 OR52R1Q8NGF1 315 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 NPRL2Q8WTW4 380 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 METTL21AQ8WXB1 218 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 AQP3Q92482 292 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 RASD2Q96D21 266 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 ADGRG7Q96K78 797 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 OR10C1Q96KK4 312 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 G6PC3Q9BUM1 346 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 NUDT9Q9BW91 350 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 GPR87Q9BY21 358 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 PCED1AQ9H1Q7 454 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 IL17BQ9UHF5 180 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 RPS4Y1P22090 263 aaKnown RBP10.75□□□□□ -0.69
C9orf3-203ENST00000375315 SUCLG1P53597 346 aaKnown RBP10.75□□□□□ -0.69
C9orf3-203ENST00000375315 TMEM33P57088 247 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 CLN3Q13286 438 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 HIKESHIQ53FT3 197 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 TMEM183AQ8IXX5 376 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 PRR22Q8IZ63 422 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 GATSQ8NAP1 163 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 CHST4Q8NCG5 386 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 SAP25Q8TEE9 199 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 NKD1Q969G9 470 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 FAM210BQ96KR6 192 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 C4orf45Q96LM5 186 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 GAL3ST4Q96RP7 486 aa10.75□□□□□ -0.69
C9orf3-203ENST00000375315 CCNL2Q96S94 520 aaPredicted RBP10.75□□□□□ -0.69
C9orf3-203ENST00000375315 MKKSQ9NPJ1 570 aaPredicted RBP10.75□□□□□ -0.69
C9orf3-203ENST00000375315 TIAF1O95411 115 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 ALG10BQ5I7T1 473 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 SLC35D2Q76EJ3 337 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 C1orf87Q8N0U7 546 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 ZNF321PQ8N8H1 164 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 COX18Q8N8Q8 333 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 SNX22Q96L94 193 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 AKIRIN1Q9H9L7 192 aaPredicted RBP10.74□□□□□ -0.69
C9orf3-203ENST00000375315 SUSD2Q9UGT4 822 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 V9GYS6 101 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 ASPMQ8IZT6 3477 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 HSPB2A8KAH6 182 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 NPY4RP50391 375 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 DLK1P80370 383 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 GLO1Q04760 184 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 HSPB2Q16082 182 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 C4orf17Q53FE4 359 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 FAM219AQ8IW50 185 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 ANKRD9Q96BM1 317 aaPredicted RBP10.74□□□□□ -0.69
C9orf3-203ENST00000375315 SCGB3A2Q96PL1 93 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 DHDHQ9UQ10 334 aa10.74□□□□□ -0.69
C9orf3-203ENST00000375315 NGFRP08138 427 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 OR5AC1P0C628 307 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 GLIPR1P48060 266 aa10.73□□□□□ -0.69
C9orf3-203ENST00000375315 MRPS11P82912 194 aaKnown RBP10.73□□□□□ -0.69
C9orf3-203ENST00000375315 H3F3AP84243 136 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms