RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 OR2A1Q8NGT9 310 aa9.15□□□□□ -0.95
PTCH1-204ENST00000375290 NHLRC1Q6VVB1 395 aa9.15□□□□□ -0.95
PTCH1-204ENST00000375290 FAM24BQ8N5W8 94 aa9.15□□□□□ -0.95
PTCH1-204ENST00000375290 OR51H1Q8NH63 302 aa9.15□□□□□ -0.95
PTCH1-204ENST00000375290 POM121L2Q96KW2 1035 aa9.15□□□□□ -0.95
PTCH1-204ENST00000375290 VCX2Q9H322 139 aa9.15□□□□□ -0.95
PTCH1-204ENST00000375290 PLA2G10O15496 165 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 ZNF17P17021 662 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 NHLH2Q02577 135 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 SMUG1Q53HV7 270 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 SPANXN5Q5MJ07 72 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 PCNPQ8WW12 178 aaKnown RBP9.14□□□□□ -0.95
PTCH1-204ENST00000375290 FCN1O00602 326 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 ALOX12BO75342 701 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 RPS4Y1P22090 263 aaKnown RBP9.14□□□□□ -0.95
PTCH1-204ENST00000375290 GJA4P35212 333 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 MAT1AQ00266 395 aaKnown RBP9.14□□□□□ -0.95
PTCH1-204ENST00000375290 TMEM123Q8N131 208 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 REEP6Q96HR9 211 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 LRP12Q9Y561 859 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 TMEM272A0A1B0GTI8 110 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 C7orf77A4D0Y5 90 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 PITX3O75364 302 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 DCAF12Q5T6F0 453 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 LCN15Q6UWW0 184 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 CA13Q8N1Q1 262 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 ARL6IP6Q8N6S5 226 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 OR1L4Q8NGR5 311 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 CYB5R3P00387 301 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-204ENST00000375290 ELLP55199 621 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-204ENST00000375290 ZNF770Q6IQ21 691 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-204ENST00000375290 C17orf47Q8NEP4 570 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 HMGA1P17096 107 aaKnown RBP9.14□□□□□ -0.95
PTCH1-204ENST00000375290 ALKBH2Q6NS38 261 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 AQP10Q96PS8 301 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 H7C1C5 153 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 CYB561P49447 251 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 MMP16P51512 607 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 IGSF11Q5DX21 431 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 LRRC18Q8N456 261 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 ZG16BQ96DA0 208 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 ATXN7L1Q9ULK2 861 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-204ENST00000375290 TIMM8AO60220 97 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-204ENST00000375290 ARSJQ5FYB0 599 aaPredicted RBP9.14□□□□□ -0.95
PTCH1-204ENST00000375290 OR2A2Q6IF42 318 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 TMEM130Q8N3G9 435 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 TREM2Q9NZC2 230 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 C3orf85A0A1B0GTC6 90 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 FAM90A10PA6NDY2 464 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 FAM90A18PA6NE21 464 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 FAM90A16PA6NEW6 464 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 CBY3A6NI87 242 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 FAM90A20PA6NIJ5 464 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 FAM90A8PA6NJQ4 464 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 FAM90A7PA6NKC0 464 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 FAM90A22PA8MWA6 464 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 FAM90A12PA8MX19 464 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 FAM90A5PA8MXJ8 464 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 FAM90A23PA8MXZ1 464 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 ZNF737O75373 536 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 EPPINO95925 133 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 OPN1LWP04000 364 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 CRYBA1P05813 215 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 FAM90A15PP0C7V4 464 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 FAM90A13PP0C7W8 464 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 FAM90A14PP0C7W9 464 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 FAM90A24PP0C7X0 464 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 CRISP2P16562 243 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 PRTGQ2VWP7 1150 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 LRRTM1Q86UE6 522 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 PRR22Q8IZ63 422 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 ADGRG7Q96K78 797 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 TUBA4BQ9H853 241 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 SLCO1C1Q9NYB5 712 aa9.14□□□□□ -0.95
PTCH1-204ENST00000375290 ERGIC1Q969X5 290 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 CNRIP1Q96F85 164 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-204ENST00000375290 TMEM30CPA0ZSE6 113 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 TGFBR1P36897 503 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 NKAIN2Q5VXU1 208 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 CLDN23Q96B33 292 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 RCL1Q9Y2P8 373 aaKnown RBP9.13□□□□□ -0.95
PTCH1-204ENST00000375290 CDC14BO60729 498 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 CBR3O75828 277 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 QDPRP09417 244 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 KRTDAPP60985 99 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 MRPL52Q86TS9 123 aaKnown RBP9.13□□□□□ -0.95
PTCH1-204ENST00000375290 EXTL1Q92935 676 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 PDZD11Q5EBL8 140 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 NPEPL1Q8NDH3 523 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 FAAP24Q9BTP7 215 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 LSM2Q9Y333 95 aaKnown RBP9.13□□□□□ -0.95
PTCH1-204ENST00000375290 A0A1W2PN81 502 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 ISLRO14498 428 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 CHRNA7P36544 502 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 RPL29P47914 159 aaKnown RBP9.13□□□□□ -0.95
PTCH1-204ENST00000375290 ATP5IP56385 69 aaPredicted RBP9.13□□□□□ -0.95
PTCH1-204ENST00000375290 RBPJQ06330 500 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 GUCA2BQ16661 112 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 OR5D18Q8NGL1 313 aa9.13□□□□□ -0.95
PTCH1-204ENST00000375290 FGF13Q92913 245 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms