RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 A6NJ64 397 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 CA6P23280 308 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 ATP1B3P54709 279 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 TMEM50BP56557 158 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 DEFA1P59665 94 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 DEFA3P59666 94 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 RPS27AP62979 156 aaKnown RBP13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 NKX6-1P78426 367 aaPredicted RBP13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 PDZK1IP1Q13113 114 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 KLF9Q13886 244 aaPredicted RBP13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 CDH24Q86UP0 819 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 FAM89BQ8N5H3 189 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 MINDY2Q8NBR6 621 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 AQP3Q92482 292 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 BCL2L14Q9BZR8 327 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 MPC1Q9Y5U8 109 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 ATXN7O15265 892 aaPredicted RBP13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 CRTAPO75718 401 aaPredicted RBP13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 PLATP00750 562 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 TMEM225BP0DP42 221 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 MGMTP16455 207 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 GDNFP39905 211 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 VEGFCP49767 419 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 GPM6AP51674 278 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 DAZAP2Q15038 168 aaPredicted RBP13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 ZNF260Q3ZCT1 412 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 PLAC9Q5JTB6 97 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 C19orf18Q8NEA5 215 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 PXT1Q8NFP0 134 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 OR5A2Q8NGI9 324 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 RNF170Q96K19 258 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 COX4I2Q96KJ9 171 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 TM2D1Q9BX74 207 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 TMEM59Q9BXS4 323 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 OR10A4Q9H209 315 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 ZMAT3Q9HA38 289 aaKnown RBP13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 FZR1Q9UM11 496 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 KCNK7Q9Y2U2 307 aa13.42□□□□□ -0.26
NIPAL3-204ENST00000374399 ANKRD30BLA7E2S9 258 aa13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 ZNF732B4DXR9 585 aa13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 SOCS1O15524 211 aa13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 SERPINA2P20848 420 aa13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 KITLGP21583 273 aa13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 TUBG1P23258 451 aa13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 BTCP35070 178 aa13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 MRPS10P82664 201 aaKnown RBP13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 MBNL2Q5VZF2 373 aaKnown RBP13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 WDR86Q86TI4 376 aa13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 FTMTQ8N4E7 242 aa13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 OR10R2Q8NGX6 335 aa13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 SEH1LQ96EE3 360 aa13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 NUDT16L1Q9BRJ7 211 aaKnown RBP13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 CST11Q9H112 138 aa13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 TUBG2Q9NRH3 451 aa13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 PURGQ9UJV8 347 aaKnown RBP13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 HIVEP3Q5T1R4 2406 aa13.41□□□□□ -0.26
NIPAL3-204ENST00000374399 hCG_2014768A0A024R1R8 64 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 METTL21EPA6NDL7 271 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 LYRM1O43325 122 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 SFTPBP07988 381 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 CD40P25942 277 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 KIR2DL3P43628 341 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 GPR176Q14439 515 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 HACD4Q5VWC8 232 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 ZNF57Q68EA5 555 aaPredicted RBP13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 CCBE1Q6UXH8 406 aaPredicted RBP13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 FJX1Q86VR8 437 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 ZNF611Q8N823 705 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 Q8NFD4 153 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 GPX8Q8TED1 209 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 C15orf40Q8WUR7 153 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 FCAMRQ8WWV6 532 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 CPNE2Q96FN4 548 aaPredicted RBP13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 Q96M66 194 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 USB1Q9BQ65 265 aaKnown RBP13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 NEK6Q9HC98 313 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 IL36GQ9NZH8 169 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 ZNF581Q9P0T4 197 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 PLCE1Q9P212 2302 aa13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 DIDO1Q9BTC0 2240 aaKnown RBP13.4□□□□□ -0.26
NIPAL3-204ENST00000374399 A0A1B0GWJ7 208 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 TMEM235A6NFC5 223 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 ATP6V1G2-DDX39BF2Z307 99 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 H0YL77 283 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 H7C417 338 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 MELTFP08582 738 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 CHRNB4P30926 498 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 FABP6P51161 128 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 FBXL19-AS1Q494R0 122 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 RAB12Q6IQ22 244 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 Q6ZR03 302 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 GLCCI1Q86VQ1 547 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 PHF21AQ96BD5 680 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 SELENOIQ9C0D9 397 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 METTL9Q9H1A3 318 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 MTFP1Q9UDX5 166 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 DPRXA6NFQ7 191 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 F8VVB4 439 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 F8VWA3 439 aa13.39□□□□□ -0.27
NIPAL3-204ENST00000374399 MLNRO43193 412 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms