RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TOR2AQ5JU69 321 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 CLVS2Q5SYC1 327 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 ZDHHC22Q8N966 263 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 OR13G1Q8NGZ3 307 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 PPP1R1CQ8WVI7 109 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 PIGCQ92535 297 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 PRRG4Q9BZD6 226 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 GSX2Q9BZM3 304 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 PLEKHJ1Q9NW61 149 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 EHFQ9NZC4 300 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 TMA7Q9Y2S6 64 aaKnown RBP13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 LIPGQ9Y5X9 500 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 LINC00862A6NCI5 91 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 ZNF503-AS2A6NEH8 195 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 RFPL4AA6NLU0 287 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 HMSDA8MTL9 139 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 C21orf140B9A014 251 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 RFPL4AL1F8VTS6 287 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 EDN3P14138 238 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 ZNF250P15622 560 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 RRADP55042 308 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 P2RX3P56373 397 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 RSU1Q15404 277 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 NUDT16L1Q9BRJ7 211 aaKnown RBP13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 FAAP24Q9BTP7 215 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 TMEM9BQ9NQ34 198 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 B4GALT7Q9UBV7 327 aa13.89□□□□□ -0.19
CNKSR1-202ENST00000374253 FOXI3A8MTJ6 420 aaPredicted RBP13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 I3L521 148 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 SERPINA5P05154 406 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 FAM3AP98173 230 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 SRSF6Q13247 344 aaKnown RBP13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 CAMK2BQ13554 666 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 PIGYQ3MUY2 71 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 CLLU1Q5K131 121 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 GSG1LQ6UXU4 331 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 TMPRSS7Q7RTY8 843 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 MITD1Q8WV92 249 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 CXorf58Q96LI9 332 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 PHB2Q99623 299 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 OCSTAMPQ9BR26 566 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 DEFB127Q9H1M4 99 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 MYOZ1Q9NP98 299 aaPredicted RBP13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 C5orf51A6NDU8 294 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 ARGFXA6NJG6 315 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 MSTNO14793 375 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 NRASP01111 189 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 CSTBP04080 98 aaKnown RBP13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 GLRA1P23415 457 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 CPT2P23786 658 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 OPRM1P35372 400 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 NHLRC3Q5JS37 347 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 MOB3CQ70IA8 216 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 TMEM230Q96A57 120 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 BORCS8Q96FH0 119 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 ABI3Q9P2A4 366 aa13.88□□□□□ -0.19
CNKSR1-202ENST00000374253 IGKV1-12A0A0C4DH73 117 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 DHRS7CA6NNS2 312 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 IGKV1D-12P01611 117 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 MMP7P09237 267 aaPredicted RBP13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 HOXD11P31277 338 aaPredicted RBP13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 MEOX1P50221 254 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 PNLIPRP3Q17RR3 467 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 PDSS1Q5T2R2 415 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 SIGIRRQ6IA17 410 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 VASH2Q86V25 355 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 LOXL4Q96JB6 756 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 DMRTA2Q96SC8 542 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 C12orf49Q9H741 205 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 CRIM1Q9NZV1 1036 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 CSAG2Q9Y5P2 127 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 MPTX1A8MV57 137 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 ADAP1O75689 374 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 FARS2O95363 451 aaKnown RBP13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 KNG1P01042 644 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 IL2RAP01589 272 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 C4BPBP20851 252 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 MPZP25189 248 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 ALDH3B1P43353 468 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 RIPPLY2Q5TAB7 128 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 PLCXD3Q63HM9 321 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 JMJD6Q6NYC1 403 aaPredicted RBP13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 WDR13Q9H1Z4 485 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 OR51B6Q9H340 312 aa13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 MRPS18CQ9Y3D5 142 aaKnown RBP13.87□□□□□ -0.19
CNKSR1-202ENST00000374253 GEMIN2O14893 280 aaKnown RBP13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 SCO1O75880 301 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 SFTPBP07988 381 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 CD79AP11912 226 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 NAT1P18440 290 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 RBP2P50120 134 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 CHRFAM7AQ494W8 412 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 AADACL3Q5VUY0 350 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 RELL2Q8NC24 303 aaPredicted RBP13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 Q96M66 194 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 METTL9Q9H1A3 318 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 COMMD9Q9P000 198 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 GHRLQ9UBU3 117 aa13.86□□□□□ -0.19
CNKSR1-202ENST00000374253 ZNF629Q9UEG4 869 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms