RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SHBQ15464 509 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 LINC00615Q96LM1 132 aaPredicted RBP12.84□□□□□ -0.35
TRAF1-201ENST00000373887 OXGR1Q96P68 337 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 A4GNTQ9UNA3 340 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 TTC3P53804 2025 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 JUNBP17275 347 aaPredicted RBP12.84□□□□□ -0.35
TRAF1-201ENST00000373887 DUSP8Q13202 625 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 CNRIP1Q96F85 164 aaPredicted RBP12.84□□□□□ -0.35
TRAF1-201ENST00000373887 WDR61Q9GZS3 305 aaKnown RBP12.84□□□□□ -0.35
TRAF1-201ENST00000373887 NAT8BQ9UHF3 227 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 ICAM5Q9UMF0 924 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 KCNE3Q9Y6H6 103 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 PRSS37A4D1T9 235 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 CBR3O75828 277 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 GPANK1O95872 356 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 CRYABP02511 175 aaKnown RBP12.84□□□□□ -0.35
TRAF1-201ENST00000373887 RHOBP62745 196 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 SIGLEC14Q08ET2 396 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 TIPARPQ7Z3E1 657 aaKnown RBP12.84□□□□□ -0.35
TRAF1-201ENST00000373887 GALNT16Q8N428 558 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 OR4A4PQ8NGN8 299 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 OR2V1Q8NHB1 315 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 RTN4IP1Q8WWV3 396 aaPredicted RBP12.84□□□□□ -0.35
TRAF1-201ENST00000373887 AP5S1Q9NUS5 200 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 C5orf52A6NGY3 159 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 SMIM18P0DKX4 95 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 NXPH1P58417 271 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 FFAR4Q5NUL3 377 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 SPINK14Q6IE38 97 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 PWWP2BQ6NUJ5 590 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 ZNF66Q6ZN08 573 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 ARIH2OSQ8N7S6 290 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 SIRT3Q9NTG7 399 aaPredicted RBP12.84□□□□□ -0.35
TRAF1-201ENST00000373887 ZNF391Q9UJN7 358 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 LSM2Q9Y333 95 aaKnown RBP12.84□□□□□ -0.35
TRAF1-201ENST00000373887 TRBV5-4A0A0C4DH59 114 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 SDHBP21912 280 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 EGR3Q06889 387 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 OR10D4PQ8NGN7 298 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 S1PR5Q9H228 398 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 POMT1Q9Y6A1 747 aa12.84□□□□□ -0.35
TRAF1-201ENST00000373887 BCL2L11O43521 198 aa12.83□□□□□ -0.35
TRAF1-201ENST00000373887 MGMTP16455 207 aa12.83□□□□□ -0.35
TRAF1-201ENST00000373887 CALCRP30988 508 aa12.83□□□□□ -0.35
TRAF1-201ENST00000373887 GPNMBQ14956 572 aa12.83□□□□□ -0.35
TRAF1-201ENST00000373887 RNF212Q495C1 297 aa12.83□□□□□ -0.35
TRAF1-201ENST00000373887 RGS7BPQ6MZT1 257 aaPredicted RBP12.83□□□□□ -0.35
TRAF1-201ENST00000373887 DOK5Q9P104 306 aa12.83□□□□□ -0.35
TRAF1-201ENST00000373887 ABCD3P28288 659 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 CSF2RBP32927 897 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 CD200P41217 278 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 CLDN20P56880 219 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 SLC17A1Q14916 467 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 SLC25A37Q9NYZ2 338 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 ZNF716A6NP11 495 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 S100A8P05109 93 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 CCKARP32238 428 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 EMC4Q5J8M3 183 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 OR4C16Q8NGL9 310 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 TRGV10A0A0A0MS01 117 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 TOX3O15405 576 aaPredicted RBP12.83□□□□□ -0.36
TRAF1-201ENST00000373887 TNFSF14O43557 240 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 CTSVO60911 334 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 TSPAN12O95859 305 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 MIDNQ504T8 468 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 DHRS4L2Q6PKH6 230 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 CT55Q8WUE5 264 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 SIGLEC11Q96RL6 698 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 JAM3Q9BX67 310 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 KIAA1551Q9HCM1 1747 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 IFITM5A6NNB3 132 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 M0R1X1 148 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 HYAL3O43820 417 aaPredicted RBP12.83□□□□□ -0.36
TRAF1-201ENST00000373887 CDC14BO60729 498 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 CCL4P13236 92 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 FAHP16930 419 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 SLC25A35Q3KQZ1 300 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 SP6Q3SY56 376 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 OR1J1Q8NGS3 322 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 TMEM208Q9BTX3 173 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 TMPRSS13Q9BYE2 586 aa12.83□□□□□ -0.36
TRAF1-201ENST00000373887 KRASP01116 189 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 SPNP16150 400 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 PNLIPRP2P54317 469 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 ISL1P61371 349 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 B3GNTL1Q67FW5 361 aaPredicted RBP12.82□□□□□ -0.36
TRAF1-201ENST00000373887 ANKRD37Q7Z713 158 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 PRSS3P2Q8NHM4 247 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 KLK11Q9UBX7 282 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 DIO1P49895 249 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 LIMK1P53667 647 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 DSCR4P56555 118 aaPredicted RBP12.82□□□□□ -0.36
TRAF1-201ENST00000373887 TGIF2LYQ8IUE0 185 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 AMER3Q8N944 861 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 A0A0A6YYD5 115 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 DNASE2O00115 360 aaPredicted RBP12.82□□□□□ -0.36
TRAF1-201ENST00000373887 EPHA2P29317 976 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 C3AR1Q16581 482 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 ADPRHL1Q8NDY3 354 aa12.82□□□□□ -0.36
TRAF1-201ENST00000373887 OR2Z1Q8NG97 314 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms