RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 WDR38Q5JTN6 314 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 ZDHHC23Q8IYP9 409 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 OSR2Q8N2R0 312 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 ARRDC1Q8N5I2 433 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 OR1N1Q8NGS0 311 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 OR10C1Q96KK4 312 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 TINAGL1Q9GZM7 467 aaPredicted RBP12.74□□□□□ -0.37
LMX1B-202ENST00000373474 TMEM191AQ9H0A3 160 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 Q9N2K0 584 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 SIRPB1O00241 398 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 OR5AL1P0C617 328 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 SMIM17P0DL12 118 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 LGALS4P56470 323 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 PNRC1Q12796 327 aaPredicted RBP12.74□□□□□ -0.37
LMX1B-202ENST00000373474 C11orf40Q8WZ69 217 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 BOD1Q96IK1 185 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 LRRC61Q9BV99 259 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 SEC11CQ9BY50 192 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 FBXO4Q9UKT5 387 aa12.74□□□□□ -0.37
LMX1B-202ENST00000373474 SPTY2D1-AS1A0A0U1RR47 76 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 FAM221AA4D161 298 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 OR2J3O76001 311 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 RPEL1Q2QD12 228 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 PRR27Q6MZM9 219 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 FAM24BQ8N5W8 94 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 GPR87Q9BY21 358 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 ZNF835Q9Y2P0 537 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 EFSO43281 561 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 RPL11P62913 178 aaKnown RBP12.73□□□□□ -0.37
LMX1B-202ENST00000373474 PAX5Q02548 391 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 OR4S1Q8NGB4 309 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 OR1A1Q9P1Q5 309 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 ZNF117Q03924 483 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 FGF14Q92915 247 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 PRRX2Q99811 253 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 MARVELD1Q9BSK0 173 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 LOC102724200A0A096LPH7 203 aaPredicted RBP12.73□□□□□ -0.37
LMX1B-202ENST00000373474 TRAV34A0A0B4J273 112 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 CLEC18AA5D8T8 446 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 CDAP32320 146 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 CD200P41217 278 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 ZIC1Q15915 447 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 CLEC18CQ8NCF0 446 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 RTN4IP1Q8WWV3 396 aaPredicted RBP12.73□□□□□ -0.37
LMX1B-202ENST00000373474 H1FXQ92522 213 aaKnown RBP12.73□□□□□ -0.37
LMX1B-202ENST00000373474 EXTL1Q92935 676 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 PHF7Q9BWX1 381 aaPredicted RBP12.73□□□□□ -0.37
LMX1B-202ENST00000373474 NEU3Q9UQ49 428 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 DUXBA0A1W2PPF3 345 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 CYC1P08574 325 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 GLI4P10075 376 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 TMEM215Q68D42 235 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 MRM1Q6IN84 353 aaKnown RBP12.73□□□□□ -0.37
LMX1B-202ENST00000373474 TSPAN32Q96QS1 320 aa12.73□□□□□ -0.37
LMX1B-202ENST00000373474 MBTPS2O43462 519 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 OR10J1P30954 320 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 CCL11P51671 97 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 FUT6P51993 359 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 DUSP18Q8NEJ0 188 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 V9GYH0 126 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 FAM24AA6NFZ4 105 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 GPR3P46089 330 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 ELOBQ15370 118 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 GPR137Q96N19 417 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 MTFP1Q9UDX5 166 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 ST3GAL6Q9Y274 331 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 MMP24Q9Y5R2 645 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 HMSDA8MTL9 139 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 DHHO43323 396 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 YBX1P67809 324 aaKnown RBP12.72□□□□□ -0.37
LMX1B-202ENST00000373474 PMP22Q01453 160 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 FFAR4Q5NUL3 377 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 ERGIC1Q969X5 290 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 ZNF764Q96H86 408 aaPredicted RBP12.72□□□□□ -0.37
LMX1B-202ENST00000373474 ZNF426Q9BUY5 554 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 CCL27Q9Y4X3 112 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 LINC01565O15544 149 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 PIAS2O75928 621 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 DHRS7BQ6IAN0 325 aaPredicted RBP12.72□□□□□ -0.37
LMX1B-202ENST00000373474 MYPOPQ86VE0 399 aaPredicted RBP12.72□□□□□ -0.37
LMX1B-202ENST00000373474 MENTQ9BUN1 341 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 COL4A1P02462 1669 aa12.72□□□□□ -0.37
LMX1B-202ENST00000373474 OR2W5A6NFC9 320 aa12.71□□□□□ -0.37
LMX1B-202ENST00000373474 FCN1O00602 326 aa12.71□□□□□ -0.37
LMX1B-202ENST00000373474 SDHBP21912 280 aa12.71□□□□□ -0.37
LMX1B-202ENST00000373474 SCCPDHQ8NBX0 429 aa12.71□□□□□ -0.37
LMX1B-202ENST00000373474 CTAG2O75638 210 aa12.71□□□□□ -0.37
LMX1B-202ENST00000373474 HOXC4P09017 264 aaPredicted RBP12.71□□□□□ -0.37
LMX1B-202ENST00000373474 HES1Q14469 280 aa12.71□□□□□ -0.37
LMX1B-202ENST00000373474 RAB24Q969Q5 203 aa12.71□□□□□ -0.37
LMX1B-202ENST00000373474 B4DEV8 164 aa12.71□□□□□ -0.37
LMX1B-202ENST00000373474 SPRY1O43609 319 aaPredicted RBP12.71□□□□□ -0.37
LMX1B-202ENST00000373474 CXCL13O43927 109 aa12.71□□□□□ -0.37
LMX1B-202ENST00000373474 DSCR4P56555 118 aaPredicted RBP12.71□□□□□ -0.37
LMX1B-202ENST00000373474 ZNF468Q5VIY5 522 aaPredicted RBP12.71□□□□□ -0.37
LMX1B-202ENST00000373474 PP6455Q8WZ26 134 aa12.71□□□□□ -0.37
LMX1B-202ENST00000373474 S1PR3Q99500 378 aa12.71□□□□□ -0.37
LMX1B-202ENST00000373474 LRRC3CA6NJW4 275 aa12.71□□□□□ -0.38
LMX1B-202ENST00000373474 GSTZ1O43708 216 aaPredicted RBP12.71□□□□□ -0.38
LMX1B-202ENST00000373474 CD160O95971 181 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms