RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 DVL1P1P54792 670 aaPredicted RBP10.22□□□□□ -0.77
PTPRF-203ENST00000372407 PJVKQ0ZLH3 352 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 C4orf17Q53FE4 359 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 ABI3BPQ7Z7G0 1075 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 ADPRHL1Q8NDY3 354 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 ERGIC1Q969X5 290 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 WNT16Q9UBV4 365 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 SPP1P10451 314 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 ZBTB25P24278 435 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 SLC6A1P30531 599 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 GNG3P63215 75 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 FUT7Q11130 342 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 PPP1R1AQ13522 171 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 GUK1Q16774 197 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 SMIM21Q3B7S5 101 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 ARHGAP5-AS1Q96IT6 56 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 NMES1Q9C002 83 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 RCL1Q9Y2P8 373 aaKnown RBP10.22□□□□□ -0.77
PTPRF-203ENST00000372407 ZP3P21754 424 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 PTGFRP43088 359 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 OR10X1Q8NGY0 326 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 AKR1E2Q96JD6 320 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 TRIB1Q96RU8 372 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 GAR1Q9NY12 217 aaKnown RBP10.22□□□□□ -0.77
PTPRF-203ENST00000372407 TRPM6Q9BX84 2022 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 SLC22A20A6NK97 555 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 RER1O15258 196 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 SULT1A3P0DMM9 295 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 SULT1A4P0DMN0 295 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 KCNJ3P48549 501 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 ZNF141Q15928 474 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 ZNF425Q6IV72 752 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 Q6ZS52 159 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 SAT2Q96F10 170 aaPredicted RBP10.22□□□□□ -0.77
PTPRF-203ENST00000372407 CXorf58Q96LI9 332 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 SLC35D1Q9NTN3 355 aa10.22□□□□□ -0.77
PTPRF-203ENST00000372407 CRYM-AS1A6NIL9 109 aa10.21□□□□□ -0.77
PTPRF-203ENST00000372407 CHEK1O14757 476 aa10.21□□□□□ -0.77
PTPRF-203ENST00000372407 RAB35Q15286 201 aa10.21□□□□□ -0.77
PTPRF-203ENST00000372407 CLEC12BQ2HXU8 276 aa10.21□□□□□ -0.77
PTPRF-203ENST00000372407 COX14Q96I36 57 aa10.21□□□□□ -0.77
PTPRF-203ENST00000372407 TAAR6Q96RI8 345 aa10.21□□□□□ -0.77
PTPRF-203ENST00000372407 KIAA1217Q5T5P2 1943 aa10.21□□□□□ -0.77
PTPRF-203ENST00000372407 SLC37A1P57057 533 aa10.21□□□□□ -0.77
PTPRF-203ENST00000372407 FAM162BQ5T6X4 162 aa10.21□□□□□ -0.77
PTPRF-203ENST00000372407 DMKNQ6E0U4 476 aaPredicted RBP10.21□□□□□ -0.77
PTPRF-203ENST00000372407 SIGIRRQ6IA17 410 aa10.21□□□□□ -0.77
PTPRF-203ENST00000372407 OR2T2Q6IF00 324 aa10.21□□□□□ -0.77
PTPRF-203ENST00000372407 ZNF707Q96C28 371 aaPredicted RBP10.21□□□□□ -0.77
PTPRF-203ENST00000372407 NTNG2Q96CW9 530 aa10.21□□□□□ -0.77
PTPRF-203ENST00000372407 MRPS24Q96EL2 167 aaKnown RBP10.21□□□□□ -0.77
PTPRF-203ENST00000372407 ADGRG7Q96K78 797 aa10.21□□□□□ -0.77
PTPRF-203ENST00000372407 ZPBPQ9BS86 351 aa10.21□□□□□ -0.77
PTPRF-203ENST00000372407 RASL12Q9NYN1 266 aa10.21□□□□□ -0.77
PTPRF-203ENST00000372407 A0A1B0GTH9 108 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 TMEM272A0A1B0GTI8 110 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 RRP8O43159 456 aaKnown RBP10.21□□□□□ -0.78
PTPRF-203ENST00000372407 DHRS3O75911 302 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 DUS4LO95620 317 aaKnown RBP10.21□□□□□ -0.78
PTPRF-203ENST00000372407 SLC25A6P12236 298 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 CSF2RBP32927 897 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 CBLN3Q6UW01 205 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 TSEN54Q7Z6J9 526 aaKnown RBP10.21□□□□□ -0.78
PTPRF-203ENST00000372407 ZNF275Q9NSD4 429 aaPredicted RBP10.21□□□□□ -0.78
PTPRF-203ENST00000372407 RTTNQ86VV8 2226 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 AQP7P3A6NL99 342 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 SHISA8B8ZZ34 492 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 MPC2O95563 127 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 KRASP01116 189 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 CTRB1P17538 263 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 DRD3P35462 400 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 RPS16P62249 146 aaKnown RBP10.21□□□□□ -0.78
PTPRF-203ENST00000372407 CTRB2Q6GPI1 263 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 C8orf82Q6P1X6 216 aaPredicted RBP10.21□□□□□ -0.78
PTPRF-203ENST00000372407 Q8IYB0 196 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 SIGLECL1Q8N7X8 197 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 OR11G2Q8NGC1 345 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 OR10G3Q8NGC4 313 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 CCL27Q9Y4X3 112 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 ATP23Q9Y6H3 246 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 WSB1Q9Y6I7 421 aa10.21□□□□□ -0.78
PTPRF-203ENST00000372407 IGHV5-51A0A0C4DH38 117 aa10.2□□□□□ -0.78
PTPRF-203ENST00000372407 ZNF320A2RRD8 509 aa10.2□□□□□ -0.78
PTPRF-203ENST00000372407 HMSDA8MTL9 139 aa10.2□□□□□ -0.78
PTPRF-203ENST00000372407 NPIPB8E9PQR5 432 aa10.2□□□□□ -0.78
PTPRF-203ENST00000372407 SFT2D2O95562 160 aa10.2□□□□□ -0.78
PTPRF-203ENST00000372407 CTLA4P16410 223 aa10.2□□□□□ -0.78
PTPRF-203ENST00000372407 WIPI1Q5MNZ9 446 aaPredicted RBP10.2□□□□□ -0.78
PTPRF-203ENST00000372407 GPBAR1Q8TDU6 330 aa10.2□□□□□ -0.78
PTPRF-203ENST00000372407 PHYHIPLQ96FC7 376 aa10.2□□□□□ -0.78
PTPRF-203ENST00000372407 PIK3IP1Q96FE7 263 aa10.2□□□□□ -0.78
PTPRF-203ENST00000372407 CHRDL1Q9BU40 450 aa10.2□□□□□ -0.78
PTPRF-203ENST00000372407 ALPK2Q86TB3 2170 aa10.2□□□□□ -0.78
PTPRF-203ENST00000372407 ZNFX1Q9P2E3 1918 aaKnown RBP10.2□□□□□ -0.78
PTPRF-203ENST00000372407 HYAL3O43820 417 aaPredicted RBP10.2□□□□□ -0.78
PTPRF-203ENST00000372407 HOXC4P09017 264 aaPredicted RBP10.2□□□□□ -0.78
PTPRF-203ENST00000372407 ZIC1Q15915 447 aa10.2□□□□□ -0.78
PTPRF-203ENST00000372407 MIDNQ504T8 468 aa10.2□□□□□ -0.78
PTPRF-203ENST00000372407 OIT3Q8WWZ8 545 aa10.2□□□□□ -0.78
PTPRF-203ENST00000372407 ST6GAL2Q96JF0 529 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms