RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 FGF20Q9NP95 211 aaPredicted RBP12.62□□□□□ -0.39
SS18L1-202ENST00000370848 MMP26Q9NRE1 261 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 CTSZQ9UBR2 303 aa12.62□□□□□ -0.39
SS18L1-202ENST00000370848 A0A1B0GW55 424 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 OOEPA6NGQ2 149 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 TMEM210A6NLX4 147 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 TRAPPC2LH3BP13 241 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 XPNPEP2O43895 674 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 NRASP01111 189 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 GYPAP02724 150 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 TFF1P04155 84 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 DUX4L2P0CJ85 424 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 DUX4L3P0CJ86 424 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 DUX4L4P0CJ87 422 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 DUX4L5P0CJ88 424 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 DUX4L6P0CJ89 424 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 DUX4L7P0CJ90 424 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 PPIAL4GP0DN37 164 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 ZNF12P17014 697 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 ETV1P50549 477 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 IL18R1Q13478 541 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 CEACAM21Q3KPI0 293 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 KLHL22Q53GT1 634 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 CLVS2Q5SYC1 327 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 ZBTB37Q5TC79 503 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 FDX2Q6P4F2 183 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 DUX4L9Q6RFH8 374 aaPredicted RBP12.61□□□□□ -0.39
SS18L1-202ENST00000370848 KCTD20Q7Z5Y7 419 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 FAM90A1Q86YD7 464 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 SYS1Q8N2H4 156 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 NPRL2Q8WTW4 380 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 FBLIM1Q8WUP2 373 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 GGHQ92820 318 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 DACT3Q96B18 629 aaPredicted RBP12.61□□□□□ -0.39
SS18L1-202ENST00000370848 HIST1H2AAQ96QV6 131 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 WDR13Q9H1Z4 485 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 VCXQ9H320 206 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 OR51I2Q9H344 312 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 INPP5EQ9NRR6 644 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 DUX4Q9UBX2 424 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 CLEC2DQ9UHP7 191 aa12.61□□□□□ -0.39
SS18L1-202ENST00000370848 OR4C45A6NMZ5 311 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 H0YHG0 523 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 TNFRSF13BO14836 293 aaPredicted RBP12.6□□□□□ -0.39
SS18L1-202ENST00000370848 AKR7A2O43488 359 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 FCN3O75636 299 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 UBCP0CG48 685 aaKnown RBP12.6□□□□□ -0.39
SS18L1-202ENST00000370848 HKR1P10072 659 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 FPR2P25090 351 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 GTF2A1P52655 376 aaPredicted RBP12.6□□□□□ -0.39
SS18L1-202ENST00000370848 GNG3P63215 75 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 PAX2Q02962 417 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 ALKBH1Q13686 389 aaKnown RBP12.6□□□□□ -0.39
SS18L1-202ENST00000370848 AWAT1Q58HT5 328 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 FAM76BQ5HYJ3 339 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 PRR31Q5SQ13 230 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 OR2G6Q5TZ20 316 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 TEX36Q5VZQ5 186 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 XAF1Q6GPH4 301 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 DCDC5Q6ZRR9 648 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 C9orf139Q6ZV77 190 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 BPIFB2Q8N4F0 458 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 C3orf56Q8N813 242 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 OR51A4Q8NGJ6 313 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 TRMT10AQ8TBZ6 339 aaKnown RBP12.6□□□□□ -0.39
SS18L1-202ENST00000370848 NEIL1Q96FI4 390 aaPredicted RBP12.6□□□□□ -0.39
SS18L1-202ENST00000370848 JAM3Q9BX67 310 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 PLEKHA1Q9HB21 404 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 MIOXQ9UGB7 285 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 INSIG2Q9Y5U4 225 aa12.6□□□□□ -0.39
SS18L1-202ENST00000370848 ANKRD61A6NGH8 418 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 DHRS7CA6NNS2 312 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 SRRM5B3KS81 715 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 CLDN34H7C241 214 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 ADAM20O43506 726 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 PITPNBP48739 271 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 UBE2V2Q15819 145 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 ESCO2Q56NI9 601 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 KLF17Q5JT82 389 aaPredicted RBP12.59□□□□□ -0.39
SS18L1-202ENST00000370848 HAGHLQ6PII5 290 aaPredicted RBP12.59□□□□□ -0.39
SS18L1-202ENST00000370848 ZNF841Q6ZN19 808 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 BATF2Q8N1L9 274 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 FGFRL1Q8N441 504 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 OR8B3Q8NGG8 313 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 OR5A2Q8NGI9 324 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 ADAT3Q96EY9 351 aaPredicted RBP12.59□□□□□ -0.39
SS18L1-202ENST00000370848 ZNF488Q96MN9 340 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 OR8B2Q96RD0 313 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 ZNF747Q9BV97 191 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 SSBP3Q9BWW4 388 aaPredicted RBP12.59□□□□□ -0.39
SS18L1-202ENST00000370848 RASSF4Q9H2L5 321 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 SMURF1Q9HCE7 757 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 SNTG1Q9NSN8 517 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 ERVK-18Q9QC07 812 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 NUP50Q9UKX7 468 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 DIMT1Q9UNQ2 313 aaKnown RBP12.59□□□□□ -0.39
SS18L1-202ENST00000370848 LRCH1Q9Y2L9 728 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 HSPE1-MOB4S4R3N1 261 aa12.59□□□□□ -0.39
SS18L1-202ENST00000370848 TRAV38-1A0A0B4J264 116 aa12.58□□□□□ -0.4
SS18L1-202ENST00000370848 PQLC2LA1A4F0 135 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms