RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 DUSP13Q9UII6 198 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 ELF5Q9UKW6 265 aaPredicted RBP4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 AGPAT2O15120 278 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 KLK10O43240 276 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 TRAF3IP2O43734 574 aaPredicted RBP4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 SNAPINO95295 136 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 TTRP02766 147 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 GABRA1P14867 456 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 IL11P20809 199 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 MAGEA5P43359 124 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 CAMLGP49069 296 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 AGFG1P52594 562 aaKnown RBP4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 AKR1C1Q04828 323 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 ZFP36L1Q07352 338 aaKnown RBP4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 SLC22A25Q6T423 547 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 FAM185AQ8N0U4 392 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 LRRC75AQ8NAA5 344 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 OR51A4Q8NGJ6 313 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 OR10J5Q8NHC4 309 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 CD300LFQ8TDQ1 290 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNF385AQ96PM9 386 aaKnown RBP4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 NKX6-2Q9C056 277 aaPredicted RBP4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 CHCHD2Q9Y6H1 151 aaPredicted RBP4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 KIAA1671Q9BY89 1806 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 PLXNB3Q9ULL4 1909 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 IGLV3-32A0A0A0MS00 114 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 OR5B21A6NL26 309 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNF732B4DXR9 585 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 PRSS44E7EML9 344 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 NTN3O00634 580 aaPredicted RBP4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 ADAM11O75078 769 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 CPN1P15169 458 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 S100A2P29034 98 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 PLA2G7Q13093 441 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 KLF9Q13886 244 aaPredicted RBP4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 MPPED2Q15777 294 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 LGALSLQ3ZCW2 172 aaPredicted RBP4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 AADACL3Q5VUY0 350 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 FBXL14Q8N1E6 418 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 MARCH1Q8TCQ1 289 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 SLX1AQ9BQ83 275 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 TTTY12Q9BZ98 90 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 OR2H1Q9GZK4 316 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 TINAGL1Q9GZM7 467 aaPredicted RBP4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 CHST5Q9GZS9 411 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 UNKLQ9H9P5 680 aaKnown RBP4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 DYNLRB1Q9NP97 96 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 MPC1Q9Y5U8 109 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 FLVCR1Q9Y5Y0 555 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 RP1P56715 2156 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 PI4KAP42356 2102 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 CACNA1EQ15878 2313 aa4.69□□□□□ -1.66
SMNDC1-202ENST00000369603 HSPB6O14558 160 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 PHF1O43189 567 aaPredicted RBP4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 SPINT2O43291 252 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 LANCL1O43813 399 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 HLA-HP01893 362 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 HLA-DQB1P01920 261 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 GRPP07492 148 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 FPR2P25090 351 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 MPGP29372 298 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 RPP30P78346 268 aaKnown RBP4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 ZNF616Q08AN1 781 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 FAHD2BQ6P2I3 314 aaPredicted RBP4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 C20orf196Q8IYI0 205 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 OR5AS1Q8N127 324 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 CLRN3Q8NCR9 226 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 SLC30A7Q8NEW0 376 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 OR56B2PQ8NGI1 322 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 GPX8Q8TED1 209 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 S100PBPQ96BU1 408 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 FAHD2AQ96GK7 314 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 ARHGAP5-AS1Q96IT6 56 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 GUCD1Q96NT3 240 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 C12orf57Q99622 126 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 LOC105371267A0A1B0GV96 52 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 SPAARA0A1B0GVQ0 90 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 OR5H14A6NHG9 310 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 SDCBPO00560 298 aaPredicted RBP4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 TXNL1O43396 289 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 ANGPTL7O43827 346 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 NPIPB7O75200 414 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 TSPAN15O95858 294 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 IFNA1P01562 189 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 FTH1P19P0C7X4 201 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 PTHLHP12272 177 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 PSMB6P28072 239 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 GABRA2P47869 451 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 OR3A4PP47883 348 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 INPP5JQ15735 1006 aaPredicted RBP4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 FAM74A1Q5RGS3 127 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 C1orf100Q5SVJ3 147 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 AKR1C8PQ5T2L2 129 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 TMEM88Q6PEY1 159 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 ACOT7LQ6ZUV0 252 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 VASH2Q86V25 355 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 TUSC5Q8IXB3 177 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 LILRB2Q8N423 598 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 WDSUB1Q8N9V3 476 aa4.68□□□□□ -1.66
SMNDC1-202ENST00000369603 OR2AE1Q8NHA4 323 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms