RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 C2orf68Q2NKX9 166 aa13.06□□□□□ -0.32
CKS1B-202ENST00000368436 CEP78Q5JTW2 689 aa13.06□□□□□ -0.32
CKS1B-202ENST00000368436 KCTD18Q6PI47 426 aaPredicted RBP13.06□□□□□ -0.32
CKS1B-202ENST00000368436 OR5D13Q8NGL4 314 aa13.06□□□□□ -0.32
CKS1B-202ENST00000368436 FAM81AQ8TBF8 368 aa13.06□□□□□ -0.32
CKS1B-202ENST00000368436 AQP3Q92482 292 aa13.06□□□□□ -0.32
CKS1B-202ENST00000368436 CLPTM1LQ96KA5 538 aa13.06□□□□□ -0.32
CKS1B-202ENST00000368436 MEGF9Q9H1U4 602 aa13.06□□□□□ -0.32
CKS1B-202ENST00000368436 C1orf21Q9H246 121 aa13.06□□□□□ -0.32
CKS1B-202ENST00000368436 PPA2Q9H2U2 334 aa13.06□□□□□ -0.32
CKS1B-202ENST00000368436 ELL3Q9HB65 397 aaPredicted RBP13.06□□□□□ -0.32
CKS1B-202ENST00000368436 SLC25A19Q9HC21 320 aa13.06□□□□□ -0.32
CKS1B-202ENST00000368436 RASL12Q9NYN1 266 aa13.06□□□□□ -0.32
CKS1B-202ENST00000368436 TMEM269A0A1B0GVZ9 245 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 ANKRD61A6NGH8 418 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 AQP12BA6NM10 295 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 H0YAE9 185 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 H3BUX3 64 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 GNGT2O14610 69 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 MTRF1O75570 445 aaKnown RBP13.05□□□□□ -0.32
CKS1B-202ENST00000368436 HOXB6P17509 224 aaKnown RBP13.05□□□□□ -0.32
CKS1B-202ENST00000368436 RPS7P62081 194 aaKnown RBP13.05□□□□□ -0.32
CKS1B-202ENST00000368436 RIPPLY1Q0D2K3 151 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 APOFQ13790 326 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 ZBTB37Q5TC79 503 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 AQP12AQ8IXF9 295 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 TMEM185AQ8NFB2 350 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 PPP1R35Q8TAP8 253 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 CANT1Q8WVQ1 401 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 C17orf50Q8WW18 174 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 CCDC124Q96CT7 223 aaKnown RBP13.05□□□□□ -0.32
CKS1B-202ENST00000368436 TEAD3Q99594 435 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 SSX3Q99909 188 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 ZNF556Q9HAH1 456 aa13.05□□□□□ -0.32
CKS1B-202ENST00000368436 ZNF254O75437 659 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 ANXA8P13928 327 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 PRKACGP22612 351 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 GABRA5P31644 462 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 KIR2DS4P43632 304 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 EFNB2P52799 333 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 ROM1Q03395 351 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 AANATQ16613 207 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 TMEM236Q5W0B7 351 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 HAGHLQ6PII5 290 aaPredicted RBP13.04□□□□□ -0.32
CKS1B-202ENST00000368436 CRIP3Q6Q6R5 217 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 ACP7Q6ZNF0 438 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 MOB3CQ70IA8 216 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 THAP5Q7Z6K1 395 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 HS3ST5Q8IZT8 346 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 C11orf42Q8N5U0 333 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 POC1AQ8NBT0 407 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 OR5K1Q8NHB7 308 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 FAM110DQ8TAY7 271 aaPredicted RBP13.04□□□□□ -0.32
CKS1B-202ENST00000368436 OR8B4Q96RC9 309 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 MROQ9BYG7 248 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 PBOV1Q9GZY1 135 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 FAM234AQ9H0X4 552 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 YY1AP1Q9H869 796 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 GPR84Q9NQS5 396 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 C19orf12Q9NSK7 152 aa13.04□□□□□ -0.32
CKS1B-202ENST00000368436 CCDC182A6NF36 153 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 PRR32B1ATL7 298 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 PSMD9O00233 223 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 GSC2O15499 205 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 E2F6O75461 281 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 CSF1P09603 554 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 HERPUD1Q15011 391 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 LRRC75BQ2VPJ9 315 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 DMRTC1Q5HYR2 192 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 C11orf88Q6PI97 169 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 MKXQ8IYA7 352 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 ZNF679Q8IYX0 411 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 FAM185AQ8N0U4 392 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 CD177Q8N6Q3 437 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 OR51G2Q8NGK0 314 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 OR51E1Q8TCB6 317 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 RORBQ92753 470 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 PPP1R14AQ96A00 147 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 THTPAQ9BU02 230 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 TEX12Q9BXU0 123 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 NUFIP1Q9UHK0 495 aaKnown RBP13.03□□□□□ -0.32
CKS1B-202ENST00000368436 ENPP5Q9UJA9 477 aa13.03□□□□□ -0.32
CKS1B-202ENST00000368436 RFPL4AA6NLU0 287 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 RFPL4AL1F8VTS6 287 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 ANGPTL7O43827 346 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 NOS1APO75052 506 aaPredicted RBP13.02□□□□□ -0.33
CKS1B-202ENST00000368436 FAHP16930 419 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 SNAPC1Q16533 368 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 SMIM21Q3B7S5 101 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 PLCXD3Q63HM9 321 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 TMEM200BQ69YZ2 307 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 COMMD2Q86X83 199 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 C1QL4Q86Z23 238 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 ZNF561Q8N587 486 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 ASB17Q8WXJ9 295 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 CFHR4Q92496 578 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 RANBP3Q9H6Z4 567 aaPredicted RBP13.02□□□□□ -0.33
CKS1B-202ENST00000368436 HEXA-AS1Q9H8Q6 139 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 TVP23BQ9NYZ1 205 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 COPS3Q9UNS2 423 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms