RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 NOL4LQ96MY1 436 aaPredicted RBP11.53□□□□□ -0.56
VAMP4-202ENST00000367740 FNDC11Q9BVV2 318 aa11.53□□□□□ -0.56
VAMP4-202ENST00000367740 FN3KQ9H479 309 aa11.53□□□□□ -0.56
VAMP4-202ENST00000367740 KCNG2Q9UJ96 466 aa11.53□□□□□ -0.56
VAMP4-202ENST00000367740 MEX3AA1L020 520 aaKnown RBP11.52□□□□□ -0.57
VAMP4-202ENST00000367740 RGS16O15492 202 aaPredicted RBP11.52□□□□□ -0.57
VAMP4-202ENST00000367740 RBP4P02753 201 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 ZNF823P16415 610 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 PRR20EP86478 221 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 PRR20CP86479 221 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 PRR20DP86480 221 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 PRR20BP86481 221 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 PRR20AP86496 221 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 PRDX4Q13162 271 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 TIGD6Q17RP2 521 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 KRT71Q3SY84 523 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 CYBRD1Q53TN4 286 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 KCTD8Q6ZWB6 473 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 ZNF561Q8N587 486 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 ANKRD42Q8N9B4 389 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 OR4C15Q8NGM1 316 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 DDB2Q92466 427 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 KCNJ15Q99712 375 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 EBF4Q9BQW3 602 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 NSRP1Q9H0G5 558 aaKnown RBP11.52□□□□□ -0.57
VAMP4-202ENST00000367740 MPC1Q9Y5U8 109 aa11.52□□□□□ -0.57
VAMP4-202ENST00000367740 RFPL4AA6NLU0 287 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 ZNF850A8MQ14 1090 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 RFPL4AL1F8VTS6 287 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 SLC1A7O00341 560 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 SASH3O75995 380 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 RENP00797 406 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 ACTA2P62736 377 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 ACTG2P63267 376 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 ACTC1P68032 377 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 ACTA1P68133 377 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 LRRC23Q53EV4 343 aaPredicted RBP11.51□□□□□ -0.57
VAMP4-202ENST00000367740 DCXRQ7Z4W1 244 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 CSNK2A3Q8NEV1 391 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 OR8U1Q8NH10 309 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 CHPT1Q8WUD6 406 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 RSRC1Q96IZ7 334 aaKnown RBP11.51□□□□□ -0.57
VAMP4-202ENST00000367740 TPD52L3Q96J77 140 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 ERMAPQ96PL5 475 aaPredicted RBP11.51□□□□□ -0.57
VAMP4-202ENST00000367740 C1orf21Q9H246 121 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 TMEM5Q9Y2B1 443 aa11.51□□□□□ -0.57
VAMP4-202ENST00000367740 IGHV2-26A0A0B4J1V2 119 aa11.5□□□□□ -0.57
VAMP4-202ENST00000367740 OR6C68A6NDL8 312 aa11.5□□□□□ -0.57
VAMP4-202ENST00000367740 ZNF728P0DKX0 622 aa11.5□□□□□ -0.57
VAMP4-202ENST00000367740 HIST1H1CP16403 213 aaKnown RBP11.5□□□□□ -0.57
VAMP4-202ENST00000367740 MYF6P23409 242 aa11.5□□□□□ -0.57
VAMP4-202ENST00000367740 ACKR3P25106 362 aa11.5□□□□□ -0.57
VAMP4-202ENST00000367740 IL18R1Q13478 541 aa11.5□□□□□ -0.57
VAMP4-202ENST00000367740 GFOD2Q3B7J2 385 aa11.5□□□□□ -0.57
VAMP4-202ENST00000367740 LYPD4Q6UWN0 246 aa11.5□□□□□ -0.57
VAMP4-202ENST00000367740 C16orf89Q6UX73 402 aa11.5□□□□□ -0.57
VAMP4-202ENST00000367740 ACP7Q6ZNF0 438 aa11.5□□□□□ -0.57
VAMP4-202ENST00000367740 OR4P4Q8NGL7 312 aa11.5□□□□□ -0.57
VAMP4-202ENST00000367740 OR4K13Q8NH42 304 aa11.5□□□□□ -0.57
VAMP4-202ENST00000367740 SLAMF6Q96DU3 332 aa11.5□□□□□ -0.57
VAMP4-202ENST00000367740 RNF170Q96K19 258 aa11.5□□□□□ -0.57
VAMP4-202ENST00000367740 CDRT15Q96T59 188 aa11.5□□□□□ -0.57
VAMP4-202ENST00000367740 SLC22A2O15244 555 aa11.49□□□□□ -0.57
VAMP4-202ENST00000367740 IFNA14P01570 189 aa11.49□□□□□ -0.57
VAMP4-202ENST00000367740 TK1P04183 234 aa11.49□□□□□ -0.57
VAMP4-202ENST00000367740 ANXA2P07355 339 aaKnown RBP11.49□□□□□ -0.57
VAMP4-202ENST00000367740 CX3CR1P49238 355 aa11.49□□□□□ -0.57
VAMP4-202ENST00000367740 IDH3AP50213 366 aa11.49□□□□□ -0.57
VAMP4-202ENST00000367740 GPM6AP51674 278 aa11.49□□□□□ -0.57
VAMP4-202ENST00000367740 TNFAIP8L3Q5GJ75 292 aa11.49□□□□□ -0.57
VAMP4-202ENST00000367740 TCF23Q7RTU1 214 aa11.49□□□□□ -0.57
VAMP4-202ENST00000367740 PRSS45Q7RTY3 260 aa11.49□□□□□ -0.57
VAMP4-202ENST00000367740 FTMTQ8N4E7 242 aa11.49□□□□□ -0.57
VAMP4-202ENST00000367740 DCLRE1BQ9H816 532 aa11.49□□□□□ -0.57
VAMP4-202ENST00000367740 CENPMQ9NSP4 180 aa11.49□□□□□ -0.57
VAMP4-202ENST00000367740 ZNF319Q9P2F9 582 aa11.49□□□□□ -0.57
VAMP4-202ENST00000367740 LINC00527Q9UJ94 153 aa11.49□□□□□ -0.57
VAMP4-202ENST00000367740 TVP23AA6NH52 213 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 ZNF878C9JN71 531 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 M0QZK8 103 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 ANGPT2O15123 496 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 LDLRAD4O15165 306 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 CFL1P23528 166 aaKnown RBP11.48□□□□□ -0.57
VAMP4-202ENST00000367740 HTR1DP28221 377 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 PRDX2P32119 198 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 BRS3P32247 399 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 OMPP47874 163 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 SELENOWP63302 87 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 KRT72Q14CN4 511 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 TAF13Q15543 124 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 SNCBQ16143 134 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 SNAPC1Q16533 368 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 LCNL1Q6ZST4 164 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 VTCN1Q7Z7D3 282 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 LINC00471Q8N535 108 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 COMMD1Q8N668 190 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 STMN2Q93045 179 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 OR8B4Q96RC9 309 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 OR51I2Q9H344 312 aa11.48□□□□□ -0.57
VAMP4-202ENST00000367740 ABCB9Q9NP78 766 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms