RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 LCN15Q6UWW0 184 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 C20orf196Q8IYI0 205 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 MRGPRDQ8TDS7 321 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 TSPAN32Q96QS1 320 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 SEBOXQ9HB31 216 aaPredicted RBP9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 SBK3P0C264 359 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 KCNJ3P48549 501 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 MLF1P58340 268 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 ZIC1Q15915 447 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 Q3ZCU0 254 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 SLC38A6Q8IZM9 456 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 ABHD3Q8WU67 409 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 TVP23CQ96ET8 276 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 WDR34Q96EX3 536 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 GMPPAQ96IJ6 420 aaPredicted RBP9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 CDCA4Q9BXL8 241 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 C1RLQ9NZP8 487 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 FOXJ3Q9UPW0 622 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 CSAG2Q9Y5P2 127 aa9.4□□□□□ -0.9
CACNA1S-201ENST00000362061 USP54Q70EL1 1684 aa9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 OR5B21A6NL26 309 aa9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 FABP7O15540 132 aa9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 IGFBP7Q16270 282 aa9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 FAHD2BQ6P2I3 314 aaPredicted RBP9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 ZNF574Q6ZN55 896 aaPredicted RBP9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 OR6X1Q8NH79 312 aa9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 YIPF5Q969M3 257 aa9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 GNPNAT1Q96EK6 184 aaPredicted RBP9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 FAHD2AQ96GK7 314 aa9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 NRTNQ99748 197 aa9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 RSRP1Q9BUV0 290 aa9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 RNF7Q9UBF6 113 aa9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 CLN8Q9UBY8 286 aa9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 AK3Q9UIJ7 227 aa9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 PILRBQ9UKJ0 227 aa9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 MPC1Q9Y5U8 109 aa9.4□□□□□ -0.91
CACNA1S-201ENST00000362061 HOXD4P09016 255 aaPredicted RBP9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 FBP1P09467 338 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 PNLIPRP3Q17RR3 467 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 ZNF788Q6ZQV5 615 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 SVBPQ8N300 66 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 OR4S1Q8NGB4 309 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 RHNO1Q9BSD3 238 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 TMEM147Q9BVK8 224 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 C20orf141Q9NUB4 165 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 TRAPPC4Q9Y296 219 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 COL22A1Q8NFW1 1626 aaPredicted RBP9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 COX5AP20674 150 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 MDH2P40926 338 aaKnown RBP9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 FAM122CQ6P4D5 195 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 NCCRP1Q6ZVX7 275 aaPredicted RBP9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 COA4Q9NYJ1 87 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 CD3DP04234 171 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 PMP22Q01453 160 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 TGIF1Q15583 401 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 SPICQ8N5J4 248 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 DDA1Q9BW61 102 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 CLEC5AQ9NY25 188 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 PTBP1P26599 531 aaKnown RBP eCLIP9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 CD96P40200 585 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 NAAAQ02083 359 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 HMGN3Q15651 99 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 HIKESHIQ53FT3 197 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 C12orf10Q9HB07 376 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 SLC31A2O15432 143 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 TOX4O94842 621 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 CD160O95971 181 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 CD1EP15812 388 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 SPINK2P20155 84 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 SKA3Q8IX90 412 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 HSD17B10Q99714 261 aaKnown RBP9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 PCGF1Q9BSM1 259 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 TINAGQ9UJW2 476 aa9.39□□□□□ -0.91
CACNA1S-201ENST00000362061 A0A1W2PN81 502 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 ZNF724A8MTY0 619 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 MBP02144 154 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 MT-ND4LP03901 98 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 M6PRP20645 277 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 CHRNA7P36544 502 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 ETFRF1Q6IPR1 90 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 SSX8Q7RTT4 187 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 SLC51BQ86UW2 128 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 MFSD4AQ8N468 514 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 OR4F5Q8NH21 305 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 LHX4Q969G2 390 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 ZG16BQ96DA0 208 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 OR4F4Q96R69 305 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 RNF167Q9H6Y7 350 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 NUPL2O15504 423 aaKnown RBP9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 ZNF354AO60765 605 aaPredicted RBP9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 SELENOPP49908 381 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 PRSS12P56730 875 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 FABP5Q01469 135 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 TMEM267Q0VDI3 215 aaPredicted RBP9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 TNXAQ16473 311 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 PRR27Q6MZM9 219 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 ASCL5Q7RTU5 278 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 PLEKHB1Q9UF11 243 aaPredicted RBP9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 PCOLCE2Q9UKZ9 415 aa9.38□□□□□ -0.91
CACNA1S-201ENST00000362061 SPTA1P02549 2419 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms