RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 ALKBH4Q9NXW9 302 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 COA4Q9NYJ1 87 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 IGHG1P01857 330 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 H2AFB1P0C5Y9 115 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 MPZP25189 248 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 CD27P26842 260 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 PTGFRP43088 359 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 TAF9Q16594 264 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 CHRFAM7AQ494W8 412 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 ST8SIA1Q92185 356 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 NECAB3Q96P71 396 aaPredicted RBP9.27□□□□□ -0.93
SMC3-201ENST00000361804 OR6C1Q96RD1 312 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 WDR77Q9BQA1 342 aaPredicted RBP9.27□□□□□ -0.93
SMC3-201ENST00000361804 PIAS2O75928 621 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 SRFP11831 508 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 DCDP81605 110 aaKnown RBP9.27□□□□□ -0.93
SMC3-201ENST00000361804 SNAI3Q3KNW1 292 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 PHLDA2Q53GA4 152 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 FAHD2BQ6P2I3 314 aaPredicted RBP9.27□□□□□ -0.93
SMC3-201ENST00000361804 OR14K1Q8NGZ2 314 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 GLYATL2Q8WU03 294 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 FAHD2AQ96GK7 314 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 RSRP1Q9BUV0 290 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 SH3BGRL3Q9H299 93 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 WNT16Q9UBV4 365 aa9.27□□□□□ -0.93
SMC3-201ENST00000361804 CARHSP1Q9Y2V2 147 aaKnown RBP9.27□□□□□ -0.93
SMC3-201ENST00000361804 CCDC163A0A0D9SF12 145 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 C3orf80F5H4A9 247 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 EIF3GO75821 320 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMC3-201ENST00000361804 ZNF43P17038 809 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 FPR2P25090 351 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 LHFPL1Q86WI0 220 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 MARS2Q96GW9 593 aaKnown RBP9.26□□□□□ -0.93
SMC3-201ENST00000361804 C2orf50Q96LR7 162 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 JSRP1Q96MG2 331 aaPredicted RBP9.26□□□□□ -0.93
SMC3-201ENST00000361804 RAB18Q9NP72 206 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 ZFP57Q9NU63 452 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 B3GALT5Q9Y2C3 310 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 DOCK7Q96N67 2140 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 ATXN7O15265 892 aaPredicted RBP9.26□□□□□ -0.93
SMC3-201ENST00000361804 SNRNP70P08621 437 aaKnown RBP9.26□□□□□ -0.93
SMC3-201ENST00000361804 FCGR2CP31995 323 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 TMEM33P57088 247 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 NXPH1P58417 271 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 HNRNPKP61978 463 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMC3-201ENST00000361804 RSPO1Q2MKA7 263 aaPredicted RBP9.26□□□□□ -0.93
SMC3-201ENST00000361804 VAX1Q5SQQ9 334 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 THEM4Q5T1C6 240 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 OR5T2Q8NGG2 359 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 GNRHR2Q96P88 292 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 SULT4A1Q9BR01 284 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 CHRNA10Q9GZZ6 450 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 NXT1Q9UKK6 140 aaKnown RBP9.26□□□□□ -0.93
SMC3-201ENST00000361804 PIGLQ9Y2B2 252 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 KLF2Q9Y5W3 355 aaPredicted RBP9.26□□□□□ -0.93
SMC3-201ENST00000361804 AKAP13Q12802 2813 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 DUX1O43812 170 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 SNAPINO95295 136 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 CHRM2P08172 466 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 TMEM225BP0DP42 221 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 CPT2P23786 658 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 RPL12P30050 165 aaKnown RBP9.26□□□□□ -0.93
SMC3-201ENST00000361804 TAS2R31P59538 309 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 ZNF616Q08AN1 781 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 OR56B1Q8NGI3 324 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 OR11L1Q8NGX0 322 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 NANPQ8TBE9 248 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 RBM24Q9BX46 236 aaKnown RBP9.26□□□□□ -0.93
SMC3-201ENST00000361804 ZNF160Q9HCG1 818 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 MGAQ8IWI9 3026 aa9.26□□□□□ -0.93
SMC3-201ENST00000361804 FAM230AA0A1W2PPH8 454 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 COLCA2A8K830 154 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 NXPH3O95157 252 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 GSTP1P09211 210 aaKnown RBP9.25□□□□□ -0.93
SMC3-201ENST00000361804 TDGF1P13385 188 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 CAV2P51636 162 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 HABP2Q14520 560 aaPredicted RBP9.25□□□□□ -0.93
SMC3-201ENST00000361804 NKAIN1Q4KMZ8 207 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 C10orf91Q5T1B1 145 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 PEG10Q86TG7 708 aaKnown RBP9.25□□□□□ -0.93
SMC3-201ENST00000361804 PLXDC1Q8IUK5 500 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 ARRDC1Q8N5I2 433 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 MVB12AQ96EY5 273 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 SHDQ96IW2 340 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 AQP10Q96PS8 301 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 RPS10P5Q9NQ39 176 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 B3GALT1Q9Y5Z6 326 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 ARG1P05089 322 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 PEA15Q15121 130 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 GGNBP1Q5YKI7 109 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 SLC25A47Q6Q0C1 308 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 PLXDC2Q6UX71 529 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 WDSUB1Q8N9V3 476 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 SFT2D1Q8WV19 159 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 OCSTAMPQ9BR26 566 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 SEC11CQ9BY50 192 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 RAB33BQ9H082 229 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 WFDC1Q9HC57 220 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 hCG_1809904A0A1W2PP81 198 aa9.25□□□□□ -0.93
SMC3-201ENST00000361804 A0A1W2PR64 198 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms