RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 M0QYG6 137 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 RER1O15258 196 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 CD8AP01732 235 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 CST2P09228 141 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 CD34P28906 385 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 GRB2P62993 217 aaKnown RBP11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 ENDOGQ14249 297 aaKnown RBP11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 ZNF660Q6AZW8 331 aaPredicted RBP11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 OR2A2Q6IF42 318 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 NUFIP2Q7Z417 695 aaKnown RBP11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 LINC00052Q96N35 136 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 TINAGL1Q9GZM7 467 aaPredicted RBP11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 G6PC2Q9NQR9 355 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 TUBD1Q9UJT1 453 aa11.48□□□□□ -0.57
SQSTM1-201ENST00000360718 RPL36A-HNRNPH2H7BZ11 118 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 SS18L1O75177 396 aaPredicted RBP11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 FGF2P09038 288 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 ZNF735P0CB33 412 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 B4GALT1P15291 398 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 MPGP29372 298 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 BDKRB2P30411 391 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 PCBD1P61457 104 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 SRSF4Q08170 494 aaKnown RBP11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 NRN1LQ496H8 165 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 SCGB2B2Q4G0G5 96 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 RNASE10Q5GAN6 216 aaKnown RBP11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 ATPAF1Q5TC12 328 aaPredicted RBP11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 ZNF585AQ6P3V2 769 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 FAM122CQ6P4D5 195 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 ZNF813Q6ZN06 617 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 SLC22A24Q8N4F4 322 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 OR10S1Q8NGN2 331 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 WNT2BQ93097 391 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 FAM46BQ96A09 425 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 GAL3ST1Q99999 423 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 C12orf49Q9H741 205 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 OR2F2O95006 317 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 SLC25A4P12235 298 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 MMP16P51512 607 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 FOXG1P55316 489 aaPredicted RBP11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 SCRN3Q0VDG4 424 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 OR2F1Q13607 317 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 TUSC1Q2TAM9 212 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 PRR30Q53SZ7 412 aaPredicted RBP11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 PXDC1Q5TGL8 231 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 ZNF324BQ6AW86 544 aaPredicted RBP11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 SLC16A14Q7RTX9 510 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 BVESQ8NE79 360 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 OR51A2Q8NGJ7 313 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 OR5M8Q8NGP6 311 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 PDCD10Q9BUL8 212 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 SHARPINQ9H0F6 387 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 SLC2A8Q9NY64 477 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 PLEK2Q9NYT0 353 aa11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 NOP16Q9Y3C1 178 aaKnown RBP11.47□□□□□ -0.57
SQSTM1-201ENST00000360718 PKD1L2Q7Z442 2459 aa11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 RP1L1Q8IWN7 2480 aaPredicted RBP11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 TPRP12270 2363 aaKnown RBP11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 KANTRA0A1W2PQU2 76 aa11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 OR5H14A6NHG9 310 aa11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 POM121CA8CG34 1229 aa11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 TSPAN9O75954 239 aa11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 SPDEFO95238 335 aa11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 MPZP25189 248 aa11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 DHRS2Q13268 280 aa11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 ACSF3Q4G176 576 aaPredicted RBP11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 LY6G6FQ5SQ64 297 aa11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 CISD2Q8N5K1 135 aaKnown RBP11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 ZDHHC22Q8N966 263 aa11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 AQP3Q92482 292 aa11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 DNTTIP1Q9H147 329 aa11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 COQ3Q9NZJ6 369 aa11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 SLC5A6Q9Y289 635 aa11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 PLEKHA6Q9Y2H5 1048 aa11.46□□□□□ -0.57
SQSTM1-201ENST00000360718 A0A1B0GTI1 187 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 WDR1O75083 606 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 APOC1P02654 83 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 PTGER4P35408 488 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 GSK3AP49840 483 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 HIST1H3AP68431 136 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 ARF1P84077 181 aaKnown RBP11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 ZNF345Q14585 488 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 CDNFQ49AH0 187 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 HIST2H3PS2Q5TEC6 136 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 HIST2H3AQ71DI3 136 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 FAM214BQ7L5A3 538 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 GCNT2Q8N0V5 402 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 KCNRGQ8N5I3 272 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 OR1J2Q8NGS2 313 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 OR1S1Q8NH92 325 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 FBXO17Q96EF6 278 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 UQCC2Q9BRT2 126 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 MOB1AQ9H8S9 216 aa11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 PNRC2Q9NPJ4 139 aaKnown RBP11.46□□□□□ -0.58
SQSTM1-201ENST00000360718 SPTA1P02549 2419 aa11.45□□□□□ -0.58
SQSTM1-201ENST00000360718 TRAV14DV4A0A0A6YYC5 116 aa11.45□□□□□ -0.58
SQSTM1-201ENST00000360718 FIGNL2A6NMB9 653 aa11.45□□□□□ -0.58
SQSTM1-201ENST00000360718 TRIM77I1YAP6 450 aa11.45□□□□□ -0.58
SQSTM1-201ENST00000360718 P2RY10O00398 339 aa11.45□□□□□ -0.58
SQSTM1-201ENST00000360718 TSPAN4O14817 238 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms