RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 CPNE4Q96A23 557 aaPredicted RBP12.53□□□□□ -0.4
SIRPA-202ENST00000358771 MED30Q96HR3 178 aa12.53□□□□□ -0.4
SIRPA-202ENST00000358771 OBP2BQ9NPH6 170 aa12.53□□□□□ -0.4
SIRPA-202ENST00000358771 SH3BGRL2Q9UJC5 107 aa12.53□□□□□ -0.4
SIRPA-202ENST00000358771 CADP27708 2225 aa12.52□□□□□ -0.4
SIRPA-202ENST00000358771 PCNX3Q9H6A9 2034 aa12.52□□□□□ -0.4
SIRPA-202ENST00000358771 OR8U9P0C7N5 309 aa12.52□□□□□ -0.4
SIRPA-202ENST00000358771 RFPL3SP0C7P2 107 aa12.52□□□□□ -0.4
SIRPA-202ENST00000358771 RAB1AP62820 205 aa12.52□□□□□ -0.4
SIRPA-202ENST00000358771 TGFBR3Q03167 851 aa12.52□□□□□ -0.4
SIRPA-202ENST00000358771 SSBP1Q04837 148 aaKnown RBP12.52□□□□□ -0.4
SIRPA-202ENST00000358771 TMEM128Q5BJH2 165 aa12.52□□□□□ -0.4
SIRPA-202ENST00000358771 ZSCAN1Q8NBB4 408 aa12.52□□□□□ -0.4
SIRPA-202ENST00000358771 CD300LFQ8TDQ1 290 aa12.52□□□□□ -0.4
SIRPA-202ENST00000358771 FAM86C1Q9NVL1 165 aa12.52□□□□□ -0.4
SIRPA-202ENST00000358771 C1orf123Q9NWV4 160 aa12.52□□□□□ -0.4
SIRPA-202ENST00000358771 BORCS7-ASMTA0A0B4J1R7 106 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 SLC34A2O95436 690 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 CAMK2BQ13554 666 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 DRAM2Q6UX65 266 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 ACOT7LQ6ZUV0 252 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 TUSC5Q8IXB3 177 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 OR56B2PQ8NGI1 322 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 NANOS1Q8WY41 292 aaKnown RBP12.52□□□□□ -0.41
SIRPA-202ENST00000358771 TMEM231Q9H6L2 316 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 VSIG4Q9Y279 399 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 RFPL4AA6NLU0 287 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 RFPL4AL1F8VTS6 287 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 XRCC2O43543 280 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 GRPP07492 148 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 RAB6AP20340 208 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 GPM6AP51674 278 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 LTC4SQ16873 150 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 C2orf68Q2NKX9 166 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 PXDC1Q5TGL8 231 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 CXorf58Q96LI9 332 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 B3GAT1Q9P2W7 334 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 KIAA1549LQ6ZVL6 1849 aa12.52□□□□□ -0.41
SIRPA-202ENST00000358771 PRRC2CQ9Y520 2896 aaKnown RBP12.52□□□□□ -0.41
SIRPA-202ENST00000358771 A0A0G2JMM0 328 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 A0A1W2PPB8 328 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 A0A1W2PRS3 328 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 KIR3DP1A8MWS1 328 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 GABRA1P14867 456 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 LSM6P62312 80 aaKnown RBP12.51□□□□□ -0.41
SIRPA-202ENST00000358771 ZXDAP98168 799 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 TGIF1Q15583 401 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 HES3Q5TGS1 186 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 C11orf87Q6NUJ2 197 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 HSD17B11Q8NBQ5 300 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 IGLV3-12A0A075B6K2 115 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 MED6O75586 246 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 IFNA2P01563 188 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 SERPINE2P07093 398 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 ZNF133P52736 654 aaPredicted RBP12.51□□□□□ -0.41
SIRPA-202ENST00000358771 PIGPP57054 158 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 SNTB1Q13884 538 aaKnown RBP12.51□□□□□ -0.41
SIRPA-202ENST00000358771 RAB35Q15286 201 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 AANATQ16613 207 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 TSPO2Q5TGU0 170 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 LPCAT3Q6P1A2 487 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 SLC25A47Q6Q0C1 308 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 VHLLQ6RSH7 139 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 CCDC71LQ8N9Z2 235 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 ARL11Q969Q4 196 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 INTS12Q96CB8 462 aaKnown RBP12.51□□□□□ -0.41
SIRPA-202ENST00000358771 MYO7BQ6PIF6 2116 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 OR6C6A6NF89 314 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 PRKACAP17612 351 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 CLINT1Q14677 625 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 WDR5BQ86VZ2 330 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 OR13C8Q8NGS7 320 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 LPAR5Q9H1C0 372 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 TMEM9BQ9NQ34 198 aa12.51□□□□□ -0.41
SIRPA-202ENST00000358771 LEUTXA8MZ59 168 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 EFSO43281 561 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 UMODP07911 640 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 CAMLGP49069 296 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 CLLU1Q5K131 121 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 CMTM1Q8IZ96 169 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 OSR2Q8N2R0 312 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 FAM173AQ9BQD7 235 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 SRXN1Q9BYN0 137 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 NECAP2Q9NVZ3 263 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 LUZP4Q9P127 313 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 ALPK3Q96L96 1907 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 MPC2O95563 127 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 FSTP19883 344 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 SNAI3Q3KNW1 292 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 MRPL14Q6P1L8 145 aaKnown RBP12.5□□□□□ -0.41
SIRPA-202ENST00000358771 FDX2Q6P4F2 183 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 ARRDC1Q8N5I2 433 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 OR5M9Q8NGP3 310 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 OR51H1Q8NH63 302 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 ANGPTL4Q9BY76 406 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.5□□□□□ -0.41
SIRPA-202ENST00000358771 OR6S1Q8NH40 331 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 RTN4IP1Q8WWV3 396 aaPredicted RBP12.5□□□□□ -0.41
SIRPA-202ENST00000358771 NINJ1Q92982 152 aa12.5□□□□□ -0.41
SIRPA-202ENST00000358771 SLAMF9Q96A28 289 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms