RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 RHOFQ9HBH0 211 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 WSB2Q9NYS7 404 aaPredicted RBP5.79□□□□□ -1.48
UPF2-201ENST00000356352 OR1A1Q9P1Q5 309 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 CHD4Q14839 1912 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 C4AP0C0L4 1744 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 SERTM1A2A2V5 107 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 F5H697 171 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 K7ESF4 209 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 SFT2D2O95562 160 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 KRASP01116 189 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 PTHLHP12272 177 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 HIST1H1DP16402 221 aaKnown RBP5.79□□□□□ -1.48
UPF2-201ENST00000356352 HERVK_113P61574 105 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 HLXQ14774 488 aaPredicted RBP5.79□□□□□ -1.48
UPF2-201ENST00000356352 C11orf42Q8N5U0 333 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 ANKRD53Q8N9V6 530 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 C2CD4CQ8TF44 421 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 BCL7CQ8WUZ0 217 aaPredicted RBP5.79□□□□□ -1.48
UPF2-201ENST00000356352 DPF1Q92782 380 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 AUNIPQ9H7T9 357 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 MMP25Q9NPA2 562 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 P4HTMQ9NXG6 502 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 TBX21Q9UL17 535 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 MPC1Q9Y5U8 109 aa5.79□□□□□ -1.48
UPF2-201ENST00000356352 PHIPQ8WWQ0 1821 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 GPANK1O95872 356 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 OR4A8P0C604 315 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 SFTA3P0C7M3 94 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 SRD5A2P31213 254 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 LPAR6P43657 344 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 LGALS7P47929 136 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 B3GNTL1Q67FW5 361 aaPredicted RBP5.78□□□□□ -1.48
UPF2-201ENST00000356352 ZNF788Q6ZQV5 615 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 TCTEX1D1Q8N7M0 179 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 OR8B3Q8NGG8 313 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 GPBAR1Q8TDU6 330 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 CNRIP1Q96F85 164 aaPredicted RBP5.78□□□□□ -1.48
UPF2-201ENST00000356352 OR8B2Q96RD0 313 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 TMEM208Q9BTX3 173 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 ISG20L2Q9H9L3 353 aaKnown RBP5.78□□□□□ -1.48
UPF2-201ENST00000356352 TMEM167BQ9NRX6 74 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 MRPL22Q9NWU5 206 aaKnown RBP5.78□□□□□ -1.48
UPF2-201ENST00000356352 ICAM5Q9UMF0 924 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 RGPD1P0DJD0 1748 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 TRAV38-1A0A0B4J264 116 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 C3orf85A0A1B0GTC6 90 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 MASP2O00187 686 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 CD82P27701 267 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 CDAP32320 146 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 GALR1P47211 349 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 HIST1H3AP68431 136 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 ZNF117Q03924 483 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 AGERQ15109 404 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 SPATA46Q5T0L3 261 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 OR4D9Q8NGE8 314 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 OR52L2PQ8NGH6 319 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 C10orf35Q96D05 121 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 MANBALQ9NQG1 85 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 DCAF16Q9NXF7 216 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 RASL12Q9NYN1 266 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 C1RLQ9NZP8 487 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 KCNMB2Q9Y691 235 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 KCNE1BA0A087WTH5 132 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 IGHV3-64DA0A0J9YX35 117 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 FAM24AA6NFZ4 105 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 GATCO43716 136 aaKnown RBP5.78□□□□□ -1.48
UPF2-201ENST00000356352 FCGR3BO75015 233 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 EPPINO95925 133 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 STAG3L2P0CL84 134 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 PI3P19957 117 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 DCTDP32321 178 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 ZNF83P51522 516 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 HOXA4Q00056 320 aaPredicted RBP5.78□□□□□ -1.48
UPF2-201ENST00000356352 ZNF154Q13106 437 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 ZNF260Q3ZCT1 412 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 WIPI1Q5MNZ9 446 aaPredicted RBP5.78□□□□□ -1.48
UPF2-201ENST00000356352 LYG1Q8N1E2 194 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 OR4S2Q8NH73 311 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 KTI12Q96EK9 354 aaPredicted RBP5.78□□□□□ -1.48
UPF2-201ENST00000356352 CXCL16Q9H2A7 254 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 SH2D2AQ9NP31 389 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 ZFP64Q9NPA5 681 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 PARD6AQ9NPB6 346 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 LPAR3Q9UBY5 353 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 FLVCR2Q9UPI3 526 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 TRAPPC4Q9Y296 219 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 NRXN3Q9Y4C0 1643 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 CYR61O00622 381 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 MBPP02686 304 aaPredicted RBP5.78□□□□□ -1.48
UPF2-201ENST00000356352 CD3EP07766 207 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 GLI4P10075 376 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 GABRG2P18507 467 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 ZP3P21754 424 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 GNG10P50151 68 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 NHLH1Q02575 133 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 NHLH2Q02577 135 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 KISS1Q15726 138 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 COL13A1Q5TAT6 717 aaPredicted RBP5.78□□□□□ -1.48
UPF2-201ENST00000356352 Q7L0L9 218 aa5.78□□□□□ -1.48
UPF2-201ENST00000356352 C20orf196Q8IYI0 205 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms