RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 FBLL1A6NHQ2 334 aaKnown RBP15.55■□□□□ 0.08
COL27A1-201ENST00000356083 PLPP1O14494 284 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 GIPP09681 153 aaPredicted RBP15.55■□□□□ 0.08
COL27A1-201ENST00000356083 ST6GAL1P15907 406 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 SELENBP1Q13228 472 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 GSG1Q2KHT4 349 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 OR4S1Q8NGB4 309 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 PCGF1Q9BSM1 259 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 PBOV1Q9GZY1 135 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 SIRT3Q9NTG7 399 aaPredicted RBP15.55■□□□□ 0.08
COL27A1-201ENST00000356083 PSG11Q9UQ72 335 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 MRC1P22897 1456 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 HRASP01112 189 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 POU3F3P20264 500 aaPredicted RBP15.55■□□□□ 0.08
COL27A1-201ENST00000356083 LKAAEAR1Q8TD35 194 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.55■□□□□ 0.08
COL27A1-201ENST00000356083 SDHAP31040 664 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 OR2T2Q6IF00 324 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 BCL7CQ8WUZ0 217 aaPredicted RBP15.54■□□□□ 0.08
COL27A1-201ENST00000356083 TMPRSS11DO60235 418 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 GFERP55789 205 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 TCTN3Q6NUS6 607 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 DRAXINQ8NBI3 349 aaPredicted RBP15.54■□□□□ 0.08
COL27A1-201ENST00000356083 NUDT3O95989 172 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 ECSCRQ19T08 205 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 SLC35D3Q5M8T2 416 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 MS4A7Q9GZW8 240 aaPredicted RBP15.54■□□□□ 0.08
COL27A1-201ENST00000356083 GALR1P47211 349 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 SHBQ15464 509 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 METRNLQ641Q3 311 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 MRGPRX1Q96LB2 322 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 HSD3B7Q9H2F3 369 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 RCL1Q9Y2P8 373 aaKnown RBP15.54■□□□□ 0.08
COL27A1-201ENST00000356083 MTNR1BP49286 362 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 UBALD2Q8IYN6 164 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 OR2T8A6NH00 312 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 MRPS14O60783 128 aaKnown RBP15.54■□□□□ 0.08
COL27A1-201ENST00000356083 MELTFP08582 738 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 RPL18Q07020 188 aaKnown RBP15.54■□□□□ 0.08
COL27A1-201ENST00000356083 SLC25A30Q5SVS4 291 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 OR52N4Q8NGI2 321 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 ELSPBP1Q96BH3 223 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 MMP17Q9ULZ9 603 aa15.54■□□□□ 0.08
COL27A1-201ENST00000356083 COL1A1P02452 1464 aaPredicted RBP15.54■□□□□ 0.08
COL27A1-201ENST00000356083 TMEM30CPA0ZSE6 113 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 SPCS3P61009 180 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 RPL24P83731 157 aaKnown RBP15.53■□□□□ 0.08
COL27A1-201ENST00000356083 SLC17A1Q14916 467 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 CD276Q5ZPR3 534 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 Q6ZN92 141 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 EIF4E3Q8N5X7 224 aaKnown RBP15.53■□□□□ 0.08
COL27A1-201ENST00000356083 SP1P08047 785 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 CLEC2LP0C7M8 214 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 DUSP6Q16828 381 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 FAM122BQ7Z309 247 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 C11orf54Q9H0W9 315 aaPredicted RBP15.53■□□□□ 0.08
COL27A1-201ENST00000356083 A4GALTQ9NPC4 353 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 FSCN3Q9NQT6 498 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 GDF2Q9UK05 429 aaPredicted RBP15.53■□□□□ 0.08
COL27A1-201ENST00000356083 ZNF77Q15935 545 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 LRP11Q86VZ4 500 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 KIR3DX1Q9H7L2 352 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 ADAMTS5Q9UNA0 930 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 THADAQ6YHU6 1953 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 A0A1B0GVG6 124 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 ADAM20O43506 726 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 CACNG7P62955 275 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 SLCO4C1Q6ZQN7 724 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 OR2I1PQ8NGU4 316 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 DYNC2LI1Q8TCX1 351 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 KCNMB2Q9Y691 235 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 LAMB4A4D0S4 1761 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 S100A8P05109 93 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 CRISP2P16562 243 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 KIR2DL1P43626 348 aaPredicted RBP15.53■□□□□ 0.08
COL27A1-201ENST00000356083 KIR2DL2P43627 348 aaPredicted RBP15.53■□□□□ 0.08
COL27A1-201ENST00000356083 SORT1Q99523 831 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 MOB4Q9Y3A3 225 aa15.53■□□□□ 0.08
COL27A1-201ENST00000356083 H0YIV9 168 aa15.52■□□□□ 0.08
COL27A1-201ENST00000356083 WNT1P04628 370 aa15.52■□□□□ 0.08
COL27A1-201ENST00000356083 NID1P14543 1247 aa15.52■□□□□ 0.08
COL27A1-201ENST00000356083 C19orf54Q5BKX5 351 aa15.52■□□□□ 0.08
COL27A1-201ENST00000356083 ABHD17CQ6PCB6 329 aa15.52■□□□□ 0.08
COL27A1-201ENST00000356083 IGHV3-21A0A0B4J1V1 117 aa15.52■□□□□ 0.08
COL27A1-201ENST00000356083 SYT5O00445 386 aa15.52■□□□□ 0.08
COL27A1-201ENST00000356083 SDF2Q99470 211 aa15.52■□□□□ 0.08
COL27A1-201ENST00000356083 NAA50Q9GZZ1 169 aaKnown RBP15.52■□□□□ 0.08
COL27A1-201ENST00000356083 TUBAL3A6NHL2 446 aa15.52■□□□□ 0.08
COL27A1-201ENST00000356083 ARRB2P32121 409 aa15.52■□□□□ 0.08
COL27A1-201ENST00000356083 OR1L1Q8NH94 360 aa15.52■□□□□ 0.08
COL27A1-201ENST00000356083 PLEKHB1Q9UF11 243 aaPredicted RBP15.52■□□□□ 0.08
COL27A1-201ENST00000356083 HLA-BQ31612 363 aa15.52■□□□□ 0.08
COL27A1-201ENST00000356083 TNFRSF10CO14798 259 aa15.52■□□□□ 0.07
COL27A1-201ENST00000356083 RTL10Q7L3V2 364 aa15.52■□□□□ 0.07
COL27A1-201ENST00000356083 LYRM4Q9HD34 91 aa15.52■□□□□ 0.07
COL27A1-201ENST00000356083 SSX1Q16384 188 aa15.52■□□□□ 0.07
COL27A1-201ENST00000356083 MOGAT1Q96PD6 335 aa15.52■□□□□ 0.07
COL27A1-201ENST00000356083 OR4C12Q96R67 309 aa15.52■□□□□ 0.07
COL27A1-201ENST00000356083 KMT2EQ8IZD2 1858 aa15.52■□□□□ 0.07
COL27A1-201ENST00000356083 TRIM77I1YAP6 450 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms