RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 OR10K1Q8NGX5 313 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 TMEM208Q9BTX3 173 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 PURGQ9UJV8 347 aaKnown RBP10.06□□□□□ -0.8
FN1-204ENST00000356005 PLPP3O14495 311 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 TXNL1O43396 289 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 OR7C2O60412 319 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 SEMA7AO75326 666 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 PTGFRP43088 359 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 P2RY6Q15077 328 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 ZNF528Q3MIS6 628 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 PABPC1L2AQ5JQF8 200 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 COMMD7Q86VX2 200 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 ZNF683Q8IZ20 524 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 SVBPQ8N300 66 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 OR52L2PQ8NGH6 319 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 ARHGDIGQ99819 225 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 IL36GQ9NZH8 169 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 ABCA4P78363 2273 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 LSAMPQ13449 338 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 SMN1Q16637 294 aaKnown RBP10.06□□□□□ -0.8
FN1-204ENST00000356005 HYAL4Q2M3T9 481 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 LAX1Q8IWV1 398 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 TERB2Q8NHR7 220 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 SIGLEC11Q96RL6 698 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 LRP12Q9Y561 859 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 ZNF407Q9C0G0 2248 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 PATE3B3GLJ2 98 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 PEX11BO96011 259 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 NGFP01138 241 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 DYNLRB2Q8TF09 96 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 ADAM19Q9H013 955 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 KMT2EQ8IZD2 1858 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 NPAP1Q9NZP6 1156 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 TRAV1-2A0A0B4J238 106 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 E5RGE8 158 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 FGF5P12034 268 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 S100A4P26447 101 aaKnown RBP10.06□□□□□ -0.8
FN1-204ENST00000356005 TLE1Q04724 770 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 SLC22A13Q9Y226 551 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 NSG2Q9Y328 171 aa10.06□□□□□ -0.8
FN1-204ENST00000356005 MLF1P58340 268 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 SLC35B1P78383 322 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 ZNF547Q8IVP9 402 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 PRR33A8MZF0 331 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 RPA2P15927 270 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 PIGPP57054 158 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 OR5I1Q13606 314 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 Q6ZPB1 254 aaPredicted RBP10.05□□□□□ -0.8
FN1-204ENST00000356005 SHISA5Q8N114 240 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 GAR1Q9NY12 217 aaKnown RBP10.05□□□□□ -0.8
FN1-204ENST00000356005 EPPINO95925 133 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 CST2P09228 141 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 ACKR3P25106 362 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 OLIG3Q7RTU3 272 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 OR2W3Q7Z3T1 314 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 LYG1Q8N1E2 194 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 DNAJC5GQ8N7S2 189 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 ZNF764Q96H86 408 aaPredicted RBP10.05□□□□□ -0.8
FN1-204ENST00000356005 CDCA4Q9BXL8 241 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 PLA2G12AQ9BZM1 189 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 MTCH1Q9NZJ7 389 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 TMEM210A6NLX4 147 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 C2orf76Q3KRA6 126 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 ZNF425Q6IV72 752 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 GPR119Q8TDV5 335 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 NYNRINQ9P2P1 1898 aaKnown RBP10.05□□□□□ -0.8
FN1-204ENST00000356005 FADS1O60427 444 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 CASP3P42574 277 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 CDK5R1Q15078 307 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 MAVSQ7Z434 540 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 TUBG2Q9NRH3 451 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 M0QYG6 137 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 TESK1Q15569 626 aa10.05□□□□□ -0.8
FN1-204ENST00000356005 FAM162BQ5T6X4 162 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 OR2T2Q6IF00 324 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 SIAH3Q8IW03 269 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 OR52N4Q8NGI2 321 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 MZB1Q8WU39 189 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 TAF9BQ9HBM6 251 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 NXPH3O95157 252 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 SLC17A5Q9NRA2 495 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 DNAJB12Q9NXW2 375 aaKnown RBP10.04□□□□□ -0.8
FN1-204ENST00000356005 CLN8Q9UBY8 286 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 A0A0G2JMZ2 1700 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 LRRC37A2A6NM11 1700 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 A0A1W2PQF6 199 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 OR2M5A3KFT3 312 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 CDK2AP1O14519 115 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 SLC25A42Q86VD7 318 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 ZNF331Q9NQX6 463 aaPredicted RBP10.04□□□□□ -0.8
FN1-204ENST00000356005 SIRT3Q9NTG7 399 aaPredicted RBP10.04□□□□□ -0.8
FN1-204ENST00000356005 IFITM5A6NNB3 132 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 SORDQ00796 357 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 PRDX4Q13162 271 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 FAHD1Q6P587 224 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 CXorf67Q86X51 503 aaPredicted RBP10.04□□□□□ -0.8
FN1-204ENST00000356005 DOLPP1Q86YN1 238 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 WDR31Q8NA23 367 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 BPIFCQ8NFQ6 507 aa10.04□□□□□ -0.8
FN1-204ENST00000356005 OR10R2Q8NGX6 335 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms