RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 SPINK14Q6IE38 97 aa16.1■□□□□ 0.17
COL18A1-202ENST00000355480 TMEM127O75204 238 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 DRD3P35462 400 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 FAM219BQ5XKK7 198 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 MOB1BQ7L9L4 216 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 CHRDL1Q9BU40 450 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 PSG11Q9UQ72 335 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 HOXB3P14651 431 aaPredicted RBP16.09■□□□□ 0.17
COL18A1-202ENST00000355480 ARRDC1Q8N5I2 433 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 AAMDCQ9H7C9 122 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 RNF24Q9Y225 148 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 ITGB4P16144 1822 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 KCNE1BA0A087WTH5 132 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 LIMK1P53667 647 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 OXA1LQ15070 435 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 TIGD3Q6B0B8 471 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 TSPAN32Q96QS1 320 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 PRRX2Q99811 253 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 TOX4O94842 621 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 PPP1CBP62140 327 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 LINC00303Q3SY05 128 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 FBXO34Q9NWN3 711 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 PAPPA2Q9BXP8 1791 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 OPRK1P41145 380 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 FABP9Q0Z7S8 132 aa16.09■□□□□ 0.17
COL18A1-202ENST00000355480 ATP6V1G2-DDX39BF2Z307 99 aa16.08■□□□□ 0.17
COL18A1-202ENST00000355480 CLEC12BQ2HXU8 276 aa16.08■□□□□ 0.17
COL18A1-202ENST00000355480 ICAM5Q9UMF0 924 aa16.08■□□□□ 0.17
COL18A1-202ENST00000355480 TBX19O60806 448 aa16.08■□□□□ 0.16
COL18A1-202ENST00000355480 SP6Q3SY56 376 aa16.08■□□□□ 0.16
COL18A1-202ENST00000355480 RAB1BQ9H0U4 201 aa16.08■□□□□ 0.16
COL18A1-202ENST00000355480 ZNF230Q9UIE0 474 aaPredicted RBP16.08■□□□□ 0.16
COL18A1-202ENST00000355480 ERRFI1Q9UJM3 462 aaPredicted RBP16.08■□□□□ 0.16
COL18A1-202ENST00000355480 C3orf80F5H4A9 247 aa16.08■□□□□ 0.16
COL18A1-202ENST00000355480 MMP15P51511 669 aa16.08■□□□□ 0.16
COL18A1-202ENST00000355480 NCR3LG1Q68D85 454 aa16.08■□□□□ 0.16
COL18A1-202ENST00000355480 ARHGAP5-AS1Q96IT6 56 aa16.08■□□□□ 0.16
COL18A1-202ENST00000355480 GAL3ST2Q9H3Q3 398 aa16.08■□□□□ 0.16
COL18A1-202ENST00000355480 OR2W3Q7Z3T1 314 aa16.08■□□□□ 0.16
COL18A1-202ENST00000355480 WDR89Q96FK6 387 aaPredicted RBP16.08■□□□□ 0.16
COL18A1-202ENST00000355480 PCBP4P57723 403 aaKnown RBP16.07■□□□□ 0.16
COL18A1-202ENST00000355480 H3F3AP84243 136 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 RHBDD2Q6NTF9 364 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 ALG14Q96F25 216 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 TRPM3Q9HCF6 1732 aaPredicted RBP16.07■□□□□ 0.16
COL18A1-202ENST00000355480 RFPL4AA6NLU0 287 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 RFPL4AL1F8VTS6 287 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 PTGFRP43088 359 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 OR3A4PP47883 348 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 MRGPREQ86SM8 312 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 SIGLECL1Q8N7X8 197 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 CABLES2Q9BTV7 478 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 MASP2O00187 686 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 PRR35P0CG20 571 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 IGFBP7Q16270 282 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 ASCL1P50553 236 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 B3GNTL1Q67FW5 361 aaPredicted RBP16.07■□□□□ 0.16
COL18A1-202ENST00000355480 ACSM6Q6P461 480 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 ARL2-SNX15V9GYD0 113 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 ADRB1P08588 477 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 UQCC2Q9BRT2 126 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 TGIF2Q9GZN2 237 aa16.07■□□□□ 0.16
COL18A1-202ENST00000355480 DUS4LO95620 317 aaKnown RBP16.06■□□□□ 0.16
COL18A1-202ENST00000355480 CD3EP07766 207 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 PATE4P0C8F1 98 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 MPGP29372 298 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 WNT3P56703 355 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 Q3ZCU0 254 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 DGAT2L6Q6ZPD8 337 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 C2CD4CQ8TF44 421 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 FAM60AQ9NP50 221 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 TJP1Q07157 1748 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 TOX3O15405 576 aaPredicted RBP16.06■□□□□ 0.16
COL18A1-202ENST00000355480 HYAL3O43820 417 aaPredicted RBP16.06■□□□□ 0.16
COL18A1-202ENST00000355480 ONECUT2O95948 504 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 FPR2P25090 351 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 CDK5Q00535 292 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 BAK1Q16611 211 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 BTNL3Q6UXE8 466 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 VN1R4Q7Z5H5 301 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 OR5D13Q8NGL4 314 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 TMEM147Q9BVK8 224 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 TNFRSF19Q9NS68 423 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 RAB7AP51149 207 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 PRRX1P54821 245 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 ZXDAP98168 799 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 TRAT1Q6PIZ9 186 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 SFTPA1Q8IWL2 248 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 IGHV3-43A0A0B4J1X8 118 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 hADV38S2A0JD32 116 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 PYCARD-AS1I3L0S3 204 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 IGHV3-43DP0DP04 118 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 NUFIP2Q7Z417 695 aaKnown RBP16.06■□□□□ 0.16
COL18A1-202ENST00000355480 FAAP24Q9BTP7 215 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 GABRA1P14867 456 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 HIST1H1DP16402 221 aaKnown RBP16.06■□□□□ 0.16
COL18A1-202ENST00000355480 AVPR2P30518 371 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 ZNF547Q8IVP9 402 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 TCFL5Q9UL49 500 aa16.06■□□□□ 0.16
COL18A1-202ENST00000355480 ASPDHA6ND91 283 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms