RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 MIDNQ504T8 468 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 POM121BA6NF01 834 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 CEACAM16Q2WEN9 425 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 FGF22Q9HCT0 170 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 WSB2Q9NYS7 404 aaPredicted RBP5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 C3orf80F5H4A9 247 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 DMRTC1Q5HYR2 192 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 OR4C16Q8NGL9 310 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 TAAR9Q96RI9 348 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 AQP6Q13520 282 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 OTUD1Q5VV17 481 aaPredicted RBP5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 CCDC190Q86UF4 302 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 OR10C1Q96KK4 312 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 SLCO1C1Q9NYB5 712 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 RPS27P42677 84 aaKnown RBP5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 FOXF1Q12946 379 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 SEC11CQ9BY50 192 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 KCNK15Q9H427 330 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 OR3A4PP47883 348 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 PMS2P11Q13670 270 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 SLC26A10Q8NG04 563 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 HSPB8Q9UJY1 196 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 DEFB108AA8MXU0 73 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 TDHQ8IZJ6 230 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 ACER3Q9NUN7 267 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 PLEKHB1Q9UF11 243 aaPredicted RBP5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 GFYI3L273 518 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 EMDP50402 254 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 DHHO43323 396 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 ACAA2P42765 397 aaKnown RBP5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 BTG2P78543 158 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 TMEM229BQ8NBD8 167 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 MVB12AQ96EY5 273 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 FRG2CA6NGY1 282 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 TFAP2AP05549 437 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 ZXDAP98168 799 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 TMEM102Q8N9M5 508 aaPredicted RBP5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 ZNF737O75373 536 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 TGFBR1P36897 503 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 PDCD1Q15116 288 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 FAM26EQ8N5C1 309 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 ADAM20O43506 726 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 BCL2L11O43521 198 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 CDK5R1Q15078 307 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 Q6ZN92 141 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 RELL2Q8NC24 303 aaPredicted RBP5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 SLC45A2Q9UMX9 530 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 IFITM5A6NNB3 132 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 HLXQ14774 488 aaPredicted RBP5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 UBALD2Q8IYN6 164 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 ZNF683Q8IZ20 524 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 A0A1B0GUH1 482 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 DCTDP32321 178 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 G6PCP35575 357 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 KIR2DL1P43626 348 aaPredicted RBP5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 KIR2DL2P43627 348 aaPredicted RBP5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 ASAH1Q13510 395 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 OR1C1Q15619 314 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 SPRED3Q2MJR0 410 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 SPINK9Q5DT21 86 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 TMEM211Q6ICI0 200 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 TMEM179BQ7Z7N9 219 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 OR1F12Q8NHA8 337 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 DPH3Q96FX2 82 aa5.2□□□□□ -1.58
SRGAP1-201ENST00000355086 FCN1O00602 326 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 SIAH2O43255 324 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 FUT3P21217 361 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 TMEM108Q6UXF1 575 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 UBALD1Q8TB05 177 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 EXTL1Q92935 676 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 FOXB1Q99853 325 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 MAP1LC3CQ9BXW4 147 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 SH2D2AQ9NP31 389 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 DPTQ07507 201 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 ZBTB44Q8NCP5 570 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 DIO1P49895 249 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 GLCCI1Q86VQ1 547 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 OR13G1Q8NGZ3 307 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 SIRT3Q9NTG7 399 aaPredicted RBP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 TDRD6O60522 2096 aaKnown RBP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 TRAV34A0A0B4J273 112 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 FAM157AC9JC47 383 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 M0R2Z0 102 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 NGFP01138 241 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 PGA3P0DJD8 388 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 CA13Q8N1Q1 262 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 PP6455Q8WZ26 134 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 hADV38S2A0JD32 116 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 CDX4O14627 284 aaPredicted RBP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 SDHBP21912 280 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 RPL24P83731 157 aaKnown RBP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 ATP6V1FQ16864 119 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 GCAP28676 217 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 TRAT1Q6PIZ9 186 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 PDPNQ86YL7 162 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 TMPRSS13Q9BYE2 586 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 UBTD1Q9HAC8 227 aa5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 COL14A1Q05707 1796 aaKnown RBP5.19□□□□□ -1.58
SRGAP1-201ENST00000355086 MGPP08493 103 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms