RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 SLAMF9Q96A28 289 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 ZNF426Q9BUY5 554 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 ST6GALNAC2Q9UJ37 374 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 CD300LBA8K4G0 201 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 MED6O75586 246 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 SFTPCP11686 197 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 MPGP29372 298 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 RANP62826 216 aaKnown RBP10.77□□□□□ -0.69
SMAD9-201ENST00000350148 NLRC3Q7RTR2 1065 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 NFAM1Q8NET5 270 aaPredicted RBP10.77□□□□□ -0.69
SMAD9-201ENST00000350148 BORCS7Q96B45 105 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 TMEM38BQ9NVV0 291 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 PURGQ9UJV8 347 aaKnown RBP10.77□□□□□ -0.69
SMAD9-201ENST00000350148 MPC1Q9Y5U8 109 aa10.77□□□□□ -0.69
SMAD9-201ENST00000350148 MGMTP16455 207 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 GNG3P63215 75 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 CLINT1Q14677 625 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 ZNF546Q86UE3 836 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 OR56B2PQ8NGI1 322 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 FGF11Q92914 225 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 MFRPQ9BY79 579 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 GPR35Q9HC97 309 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 PLXNA2O75051 1894 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 IGKV1D-42A0A075B6H8 117 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 A0A0U1RQK1 487 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 LEUTXA8MZ59 168 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 RGS13O14921 159 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 IL5P05113 134 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 ZNF250P15622 560 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 CTRB1P17538 263 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 HNRNPA3P51991 378 aaKnown RBP10.76□□□□□ -0.69
SMAD9-201ENST00000350148 PABPC1L2AQ5JQF8 200 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 CTRB2Q6GPI1 263 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 PRSS45Q7RTY3 260 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 ARRDC1Q8N5I2 433 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 OR1S1Q8NH92 325 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 BANF2Q9H503 90 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 DECR2Q9NUI1 292 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 OR14J1Q9UGF5 321 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 OR5B21A6NL26 309 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 GIPP09681 153 aaPredicted RBP10.76□□□□□ -0.69
SMAD9-201ENST00000350148 HOXB1P14653 301 aaPredicted RBP10.76□□□□□ -0.69
SMAD9-201ENST00000350148 CSRP1P21291 193 aaKnown RBP10.76□□□□□ -0.69
SMAD9-201ENST00000350148 MAGEA5P43359 124 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 SOX8P57073 446 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 CFHR1Q03591 330 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 C9orf152Q5JTZ5 239 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 KANSL1Q7Z3B3 1105 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 C1orf87Q8N0U7 546 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 EXTL1Q92935 676 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 KCNK17Q96T54 332 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 AUNIPQ9H7T9 357 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 TMEM100Q9NV29 134 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 A0A0A6YYJ9 748 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 TGFBR3LH3BV60 316 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 ACSM4P0C7M7 580 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 SMIM6P0DI80 62 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 CCR6P51684 374 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 LSM11P83369 360 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMAD9-201ENST00000350148 MAJINQ3KP22 176 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 FAM27D1Q5T7N8 215 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 FAM27BQ5VT28 67 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 PTX4Q96A99 478 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 C1QTNF6Q9BXI9 259 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 FRRS1LQ9P0K9 344 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 SLCO1B1Q9Y6L6 691 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 PCM1Q15154 2024 aa10.76□□□□□ -0.69
SMAD9-201ENST00000350148 IGLV3-32A0A0A0MS00 114 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 PRR33A8MZF0 331 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 GABRA2P47869 451 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 UBE2MP61081 183 aaKnown RBP10.75□□□□□ -0.69
SMAD9-201ENST00000350148 INSM1Q01101 510 aaPredicted RBP10.75□□□□□ -0.69
SMAD9-201ENST00000350148 RGS7BPQ6MZT1 257 aaPredicted RBP10.75□□□□□ -0.69
SMAD9-201ENST00000350148 LGI3Q8N145 548 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 ZNF519Q8TB69 540 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 WFDC6Q9BQY6 131 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 GP6Q9HCN6 339 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 DUSP13Q9UII6 198 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 LOC105371267A0A1B0GV96 52 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 TIAF1O95411 115 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 NTN1O95631 604 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 NQO2P16083 231 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 OR2B8PP59922 312 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 IMMP1LQ96LU5 166 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 SLX1AQ9BQ83 275 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 hCG_1809904A0A1W2PP81 198 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 A0A1W2PPE2 198 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 A0A1W2PR64 198 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 A0A1W2PRV1 198 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 M0R143 59 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 AGFG1P52594 562 aaKnown RBP10.75□□□□□ -0.69
SMAD9-201ENST00000350148 RIPPLY2Q5TAB7 128 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 SLC25A47Q6Q0C1 308 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 SLC30A7Q8NEW0 376 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 OR51S1Q8NGJ8 323 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 PRO1933Q9H354 126 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 ZDHHC11Q9H8X9 412 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 ZNF629Q9UEG4 869 aaPredicted RBP10.75□□□□□ -0.69
SMAD9-201ENST00000350148 SCN3AQ9NY46 2000 aa10.75□□□□□ -0.69
SMAD9-201ENST00000350148 COL4A4P53420 1690 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms