RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 SLC16A11Q8NCK7 471 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 FBXO22Q8NEZ5 403 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 OR10S1Q8NGN2 331 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 ADAMTS18Q8TE60 1221 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 SCARF2Q96GP6 870 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-203ENST00000349748 ADOQ96SZ5 270 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 PCBD2Q9H0N5 130 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 C6orf106Q9H6K1 298 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-203ENST00000349748 ZNF430Q9H8G1 570 aaPredicted RBP9.42□□□□□ -0.9
CAPN3-203ENST00000349748 RXFP3Q9NSD7 469 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 DENND4CQ5VZ89 1909 aa9.42□□□□□ -0.9
CAPN3-203ENST00000349748 YLPM1P49750 1951 aaKnown RBP9.42□□□□□ -0.9
CAPN3-203ENST00000349748 F6UZH7 168 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 OPN1LWP04000 364 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 NGFRP08138 427 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 RIPPLY3P57055 190 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 AGBL4Q5VU57 503 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 CFAP161Q6P656 301 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 ARL14EPQ8N8R7 260 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-203ENST00000349748 ZCCHC14Q8WYQ9 949 aaKnown RBP9.41□□□□□ -0.9
CAPN3-203ENST00000349748 ZNF689Q96CS4 500 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-203ENST00000349748 WDR34Q96EX3 536 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 SLC35A4Q96G79 324 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 TBL1XR1Q9BZK7 514 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 SMDT1Q9H4I9 107 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 TICRRQ7Z2Z1 1910 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 CHD7Q9P2D1 2997 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 CDC14CA4D256 554 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 TBL1XO60907 577 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 TACSTD2P09758 323 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 ZFP36L1Q07352 338 aaKnown RBP9.41□□□□□ -0.9
CAPN3-203ENST00000349748 SQSTM1Q13501 440 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 GPR18Q14330 331 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 SHHQ15465 462 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 LRRC69Q6ZNQ3 347 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 WFDC8Q8IUA0 241 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 IL22RA1Q8N6P7 574 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 AGBL5Q8NDL9 886 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 NUP43Q8NFH3 380 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 OR5T1Q8NG75 326 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 DOK4Q8TEW6 326 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 TIFAQ96CG3 184 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 CNRIP1Q96F85 164 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-203ENST00000349748 ACY3Q96HD9 319 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 BOD1Q96IK1 185 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 MRGPRX1Q96LB2 322 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 MACROD1Q9BQ69 325 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 RTBDNQ9BSG5 229 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-203ENST00000349748 SF3B5Q9BWJ5 86 aaKnown RBP9.41□□□□□ -0.9
CAPN3-203ENST00000349748 ANGPTL4Q9BY76 406 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 ZNF107Q9UII5 783 aaPredicted RBP9.41□□□□□ -0.9
CAPN3-203ENST00000349748 GPR132Q9UNW8 380 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 SLC7A11Q9UPY5 501 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 MEMO1Q9Y316 297 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 INSL6Q9Y581 213 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 OR51B4Q9Y5P0 310 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 DOCK8Q8NF50 2099 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 PRRC2BQ5JSZ5 2229 aaKnown RBP9.41□□□□□ -0.9
CAPN3-203ENST00000349748 EYSQ5T1H1 3165 aa9.41□□□□□ -0.9
CAPN3-203ENST00000349748 ABHD16AO95870 558 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 OPN1MWP04001 364 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 OPN1MW2P0DN77 364 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 OPN1MW3P0DN78 364 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 DTYMKP23919 212 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 SPOCK1Q08629 439 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 FBLN7Q53RD9 439 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 OCIAD2Q56VL3 154 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 TMEM184AQ6ZMB5 413 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 ADGRE4PQ86SQ3 457 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 LINC01551Q86U37 167 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 WDFY1Q8IWB7 410 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 SGPP2Q8IWX5 399 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 ZNF595Q8IYB9 648 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 SLC39A11Q8N1S5 342 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 EXD3Q8N9H8 876 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 KREMEN2Q8NCW0 462 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 PCGF1Q9BSM1 259 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 ALG12Q9BV10 488 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 OR10A5Q9H207 317 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 RBKSQ9H477 322 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 ZNF552Q9H707 407 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-203ENST00000349748 IL19Q9UHD0 177 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 SERTAD3Q9UJW9 196 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 SLC22A13Q9Y226 551 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 MRPS28Q9Y2Q9 187 aaKnown RBP9.4□□□□□ -0.9
CAPN3-203ENST00000349748 TRAV34A0A0B4J273 112 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 TBX19O60806 448 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 ZNF217O75362 1048 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 GOSR1O95249 250 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 C1orf105O95561 183 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 KNG1P01042 644 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 EFNA3P52797 238 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 RPL23AP62750 156 aaKnown RBP9.4□□□□□ -0.9
CAPN3-203ENST00000349748 DMWDQ09019 674 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 TAF9Q16594 264 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 CDCP2Q5VXM1 449 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 SYT13Q7L8C5 426 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 GRINAQ7Z429 371 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 KLHDC8AQ8IYD2 350 aa9.4□□□□□ -0.9
CAPN3-203ENST00000349748 ALG14Q96F25 216 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms