RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 NDUFAF3Q9BU61 184 aa13.54□□□□□ -0.24
LMNA-201ENST00000347559 DDA1Q9BW61 102 aa13.54□□□□□ -0.24
LMNA-201ENST00000347559 A0A1W2PQU0 124 aa13.54□□□□□ -0.24
LMNA-201ENST00000347559 AHSA1O95433 338 aa13.54□□□□□ -0.24
LMNA-201ENST00000347559 ISG15P05161 165 aa13.54□□□□□ -0.24
LMNA-201ENST00000347559 TSPO2Q5TGU0 170 aa13.54□□□□□ -0.24
LMNA-201ENST00000347559 KLHL24Q6TFL4 600 aa13.54□□□□□ -0.24
LMNA-201ENST00000347559 TVP23CQ96ET8 276 aa13.54□□□□□ -0.24
LMNA-201ENST00000347559 APOOQ9BUR5 198 aa13.54□□□□□ -0.24
LMNA-201ENST00000347559 ARHGEF17Q96PE2 2063 aaPredicted RBP13.54□□□□□ -0.24
LMNA-201ENST00000347559 C9J4A7 227 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 SEC13P55735 322 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 PPP1CAP62136 330 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 TNFRSF9Q07011 255 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 CST6Q15828 149 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 RTN4RQ9BZR6 473 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 DUSP15Q9H1R2 295 aaPredicted RBP13.53□□□□□ -0.24
LMNA-201ENST00000347559 ARV1Q9H2C2 271 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 ELL3Q9HB65 397 aaPredicted RBP13.53□□□□□ -0.24
LMNA-201ENST00000347559 GON4LQ3T8J9 2241 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 CDC14CA4D256 554 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 STMND1H3BQB6 276 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 MBP02144 154 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 GZMBP10144 247 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 ZNF25P17030 456 aaPredicted RBP13.53□□□□□ -0.24
LMNA-201ENST00000347559 SLC22A25Q6T423 547 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 LRRC18Q8N456 261 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 PLPP5Q8NEB5 264 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 SLC26A10Q8NG04 563 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 KCNG3Q8TAE7 436 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 FAM71F1Q96KD3 344 aaPredicted RBP13.53□□□□□ -0.24
LMNA-201ENST00000347559 FOXD3Q9UJU5 478 aaPredicted RBP13.53□□□□□ -0.24
LMNA-201ENST00000347559 WSB1Q9Y6I7 421 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 PRSS38A1L453 326 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 MKRN2OSH3BPM6 223 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 GPR137BO60478 399 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 UTS2O95399 124 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 SRP19P09132 144 aaKnown RBP13.53□□□□□ -0.24
LMNA-201ENST00000347559 BLVRBP30043 206 aaPredicted RBP13.53□□□□□ -0.24
LMNA-201ENST00000347559 CD81P60033 236 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 TMEM176BQ3YBM2 270 aaPredicted RBP13.53□□□□□ -0.24
LMNA-201ENST00000347559 TANGO2Q6ICL3 276 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 C5orf24Q7Z6I8 188 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 ZNF519Q8TB69 540 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 DAZLQ92904 295 aaKnown RBP13.53□□□□□ -0.24
LMNA-201ENST00000347559 PBOV1Q9GZY1 135 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 TXNIPQ9H3M7 391 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 SIRT7Q9NRC8 400 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 AK3Q9UIJ7 227 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 TUBD1Q9UJT1 453 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 SRPK3Q9UPE1 567 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 B3GALT1Q9Y5Z6 326 aa13.53□□□□□ -0.24
LMNA-201ENST00000347559 THSD7BQ9C0I4 1608 aa13.52□□□□□ -0.24
LMNA-201ENST00000347559 SLC33A1O00400 549 aaPredicted RBP13.52□□□□□ -0.24
LMNA-201ENST00000347559 GLIPR1P48060 266 aa13.52□□□□□ -0.24
LMNA-201ENST00000347559 TAS2R46P59540 309 aa13.52□□□□□ -0.24
LMNA-201ENST00000347559 NKAIN1Q4KMZ8 207 aa13.52□□□□□ -0.24
LMNA-201ENST00000347559 LYZL2Q7Z4W2 148 aa13.52□□□□□ -0.24
LMNA-201ENST00000347559 CPEB2Q7Z5Q1 589 aaKnown RBP13.52□□□□□ -0.24
LMNA-201ENST00000347559 OR5R1Q8NH85 324 aa13.52□□□□□ -0.24
LMNA-201ENST00000347559 MRPS23Q9Y3D9 190 aaKnown RBP13.52□□□□□ -0.24
LMNA-201ENST00000347559 TRAV36DV7A0A075B6V5 113 aa13.52□□□□□ -0.25
LMNA-201ENST00000347559 FTCDNL1E5RQL4 147 aa13.52□□□□□ -0.25
LMNA-201ENST00000347559 K7N7A8 449 aa13.52□□□□□ -0.25
LMNA-201ENST00000347559 SUCLG1P53597 346 aaKnown RBP13.52□□□□□ -0.25
LMNA-201ENST00000347559 FOXK1P85037 733 aa13.52□□□□□ -0.25
LMNA-201ENST00000347559 LHX8Q68G74 356 aa13.52□□□□□ -0.25
LMNA-201ENST00000347559 LANCL3Q6ZV70 420 aa13.52□□□□□ -0.25
LMNA-201ENST00000347559 PRTFDC1Q9NRG1 225 aa13.52□□□□□ -0.25
LMNA-201ENST00000347559 HSF4Q9ULV5 492 aa13.52□□□□□ -0.25
LMNA-201ENST00000347559 IGKV1D-8A0A087WSZ0 117 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 MMP7P09237 267 aaPredicted RBP13.51□□□□□ -0.25
LMNA-201ENST00000347559 GPR3P46089 330 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 ZNF880Q6PDB4 577 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 FBXW12Q6X9E4 464 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 ABHD12BQ7Z5M8 362 aaPredicted RBP13.51□□□□□ -0.25
LMNA-201ENST00000347559 SFTPA2Q8IWL1 248 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 C1orf87Q8N0U7 546 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 GAL3ST4Q96RP7 486 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 SUSD2Q9UGT4 822 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 NSG1A0A0A6YYJ2 146 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 IGKV1D-43A0A0B4J1Z2 117 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 H0Y8X5 98 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 FUT3P21217 361 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 ZNF117Q03924 483 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 ZNF321PQ8N8H1 164 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 OR52M1Q8NGK5 317 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 GPR119Q8TDV5 335 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 HPSE2Q8WWQ2 592 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 OR1E3Q8WZA6 343 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 HAS2Q92819 552 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 SCARF2Q96GP6 870 aaPredicted RBP13.51□□□□□ -0.25
LMNA-201ENST00000347559 URM1Q9BTM9 101 aaKnown RBP13.51□□□□□ -0.25
LMNA-201ENST00000347559 GPR87Q9BY21 358 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 VN1R1Q9GZP7 353 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 OR10A2Q9H208 303 aa13.51□□□□□ -0.25
LMNA-201ENST00000347559 A0A087WWC5 75 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 CCDC163A0A0D9SF12 145 aa13.5□□□□□ -0.25
LMNA-201ENST00000347559 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.5□□□□□ -0.25
LMNA-201ENST00000347559 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms