RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 ASAH1Q13510 395 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 MSMPQ1L6U9 139 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 ZNF718Q3SXZ3 478 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 MOGAT2Q3SYC2 334 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 TMEM69Q5SWH9 247 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 RAB12Q6IQ22 244 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 GDPD3Q7L5L3 318 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 CENPSQ8N2Z9 138 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 POC5Q8NA72 575 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 ZSCAN4Q8NAM6 433 aaPredicted RBP9.39□□□□□ -0.91
ECM1-201ENST00000346569 OR5D18Q8NGL1 313 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 SMIM4Q8WVI0 70 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 CPNE2Q96FN4 548 aaPredicted RBP9.39□□□□□ -0.91
ECM1-201ENST00000346569 NUDT16L1Q9BRJ7 211 aaKnown RBP9.39□□□□□ -0.91
ECM1-201ENST00000346569 PAPOLGQ9BWT3 736 aaKnown RBP9.39□□□□□ -0.91
ECM1-201ENST00000346569 RBMX2Q9Y388 322 aaKnown RBP9.39□□□□□ -0.91
ECM1-201ENST00000346569 SETXQ7Z333 2677 aaKnown RBP9.39□□□□□ -0.91
ECM1-201ENST00000346569 UBR5O95071 2799 aaPredicted RBP9.39□□□□□ -0.91
ECM1-201ENST00000346569 IGKV1-12A0A0C4DH73 117 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 ANKRD30BLA7E2S9 258 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 FOXI3A8MTJ6 420 aaPredicted RBP9.39□□□□□ -0.91
ECM1-201ENST00000346569 ORC5O43913 435 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 IGKV1D-12P01611 117 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 CRYAAP02489 173 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 TMEM225BP0DP42 221 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 PTHLHP12272 177 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 ZNF250P15622 560 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 PPP3CBP16298 524 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 CA6P23280 308 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 CD40P25942 277 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 GLRXP35754 106 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 RPS27AP62979 156 aaKnown RBP9.39□□□□□ -0.91
ECM1-201ENST00000346569 ZNF260Q3ZCT1 412 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 SLC22A6Q4U2R8 563 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 HACD4Q5VWC8 232 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 FJX1Q86VR8 437 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 TMEM200AQ86VY9 491 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 CALHM1Q8IU99 346 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 SAXO1Q8IYX7 474 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 MINDY2Q8NBR6 621 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 BHLHE23Q8NDY6 225 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 OR8G5Q8NG78 346 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 OR52I2Q8NH67 350 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 FAM46BQ96A09 425 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 RNF170Q96K19 258 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 WFIKKN1Q96NZ8 548 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 HIST1H2AAQ96QV6 131 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 TM2D1Q9BX74 207 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 METTL9Q9H1A3 318 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 BANF2Q9H503 90 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 AUNIPQ9H7T9 357 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 IL36GQ9NZH8 169 aa9.39□□□□□ -0.91
ECM1-201ENST00000346569 PURGQ9UJV8 347 aaKnown RBP9.39□□□□□ -0.91
ECM1-201ENST00000346569 HEATR1Q9H583 2144 aaKnown RBP9.38□□□□□ -0.91
ECM1-201ENST00000346569 A0A1B0GUH1 482 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 MEIOCA2RUB1 952 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 DPRXA6NFQ7 191 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 ZNF732B4DXR9 585 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 SULT1C2O00338 296 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 SPRY1O43609 319 aaPredicted RBP9.38□□□□□ -0.91
ECM1-201ENST00000346569 ANGPTL7O43827 346 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 SCGNO76038 276 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 MPIG6BO95866 241 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 CD3GP09693 182 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 PLA2G2AP14555 144 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 PTAFRP25105 342 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 RFX2P48378 723 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 VEGFCP49767 419 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 FABP6P51161 128 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 GPM6AP51674 278 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 DEFA1P59665 94 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 DEFA3P59666 94 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 GPR176Q14439 515 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 CDSNQ15517 529 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 FAM189A2Q15884 450 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 CDNFQ49AH0 187 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 TRIQKQ629K1 86 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 GALNT11Q8NCW6 608 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 C19orf18Q8NEA5 215 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 OR10K1Q8NGX5 313 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 OR10R2Q8NGX6 335 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 OR51F2Q8NH61 342 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 GPX8Q8TED1 209 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 AQP3Q92482 292 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 RNASE6Q93091 150 aaKnown RBP9.38□□□□□ -0.91
ECM1-201ENST00000346569 PHF21AQ96BD5 680 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 POM121Q96HA1 1249 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 NICN1Q9BSH3 213 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 TMEM59Q9BXS4 323 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 C11orf54Q9H0W9 315 aaPredicted RBP9.38□□□□□ -0.91
ECM1-201ENST00000346569 CST11Q9H112 138 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 COQ3Q9NZJ6 369 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 ERRFI1Q9UJM3 462 aaPredicted RBP9.38□□□□□ -0.91
ECM1-201ENST00000346569 SPEF1Q9Y4P9 236 aa9.38□□□□□ -0.91
ECM1-201ENST00000346569 CADP27708 2225 aa9.37□□□□□ -0.91
ECM1-201ENST00000346569 OR5B21A6NL26 309 aa9.37□□□□□ -0.91
ECM1-201ENST00000346569 H7C417 338 aa9.37□□□□□ -0.91
ECM1-201ENST00000346569 SOCS1O15524 211 aa9.37□□□□□ -0.91
ECM1-201ENST00000346569 ZNF780AO75290 641 aaPredicted RBP9.37□□□□□ -0.91
ECM1-201ENST00000346569 CRTAPO75718 401 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms