RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 PET117Q6UWS5 81 aa16.17■□□□□ 0.18
SMC4-201ENST00000344722 AMER3Q8N944 861 aa16.17■□□□□ 0.18
SMC4-201ENST00000344722 NOXO1Q8NFA2 376 aa16.17■□□□□ 0.18
SMC4-201ENST00000344722 FKBP11Q9NYL4 201 aa16.17■□□□□ 0.18
SMC4-201ENST00000344722 FRRS1LQ9P0K9 344 aa16.17■□□□□ 0.18
SMC4-201ENST00000344722 FAM166BA8MTA8 275 aa16.17■□□□□ 0.18
SMC4-201ENST00000344722 ACAA1P09110 424 aaPredicted RBP16.17■□□□□ 0.18
SMC4-201ENST00000344722 USF1P22415 310 aaPredicted RBP16.17■□□□□ 0.18
SMC4-201ENST00000344722 IL24Q13007 206 aa16.17■□□□□ 0.18
SMC4-201ENST00000344722 ABLIM2Q6H8Q1 611 aa16.17■□□□□ 0.18
SMC4-201ENST00000344722 OR11G2Q8NGC1 345 aa16.17■□□□□ 0.18
SMC4-201ENST00000344722 MASP2O00187 686 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 ERVS71-1P61550 626 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 SHHQ15465 462 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 TAAR6Q96RI8 345 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 POLDIP2Q9Y2S7 368 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 ADAMTSL3P82987 1691 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 FUT3P21217 361 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 KISS1Q15726 138 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 CD200R1LQ6Q8B3 271 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 CDC20BQ86Y33 519 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 ATOH1Q92858 354 aaPredicted RBP16.16■□□□□ 0.18
SMC4-201ENST00000344722 FGF21Q9NSA1 209 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 HIF1ANQ9NWT6 349 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 EIF3GO75821 320 aaKnown RBP eCLIP16.16■□□□□ 0.188e-13■■■■■ 59.2
SMC4-201ENST00000344722 OR5AC1P0C628 307 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 TMEM267Q0VDI3 215 aaPredicted RBP16.16■□□□□ 0.18
SMC4-201ENST00000344722 RDH5Q92781 318 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 DUSP23Q9BVJ7 150 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 KCNK15Q9H427 330 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 ST6GALNAC2Q9UJ37 374 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 SH2D1BO14796 132 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 EFSO43281 561 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 YIF1AO95070 293 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 MUC1P15941 1255 aaPredicted RBP16.16■□□□□ 0.18
SMC4-201ENST00000344722 ZNF573Q86YE8 665 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 HCFC2Q9Y5Z7 792 aa16.16■□□□□ 0.18
SMC4-201ENST00000344722 LIMK1P53667 647 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 SUMO3P55854 103 aaPredicted RBP16.15■□□□□ 0.18
SMC4-201ENST00000344722 ARG2P78540 354 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 LDLRAD3Q86YD5 345 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 MS4A3Q96HJ5 214 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 SPRY1O43609 319 aaPredicted RBP16.15■□□□□ 0.18
SMC4-201ENST00000344722 DCAF12L2Q5VW00 463 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 OBP2AQ9NY56 170 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 NAT8BQ9UHF3 227 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 DMRT1Q9Y5R6 373 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 EVPLQ92817 2033 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 CLDN15P56746 228 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 EPPINO95925 133 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 EDN3P14138 238 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 ADPRHP54922 357 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 FAM78BQ5VT40 261 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 SLC25A26Q70HW3 274 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 SDHCQ99643 169 aaPredicted RBP16.15■□□□□ 0.18
SMC4-201ENST00000344722 CALHM2Q9HA72 323 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 ZFC3H1O60293 1989 aaKnown RBP16.15■□□□□ 0.18
SMC4-201ENST00000344722 ADAMTS7Q9UKP4 1686 aa16.15■□□□□ 0.18
SMC4-201ENST00000344722 A0A1W2PNR3 127 aa16.14■□□□□ 0.18
SMC4-201ENST00000344722 OR7C2O60412 319 aa16.14■□□□□ 0.18
SMC4-201ENST00000344722 SUB1P53999 127 aaKnown RBP eCLIP16.14■□□□□ 0.185e-10■■■■■ 33.9
SMC4-201ENST00000344722 ZNF770Q6IQ21 691 aaPredicted RBP16.14■□□□□ 0.18
SMC4-201ENST00000344722 OR13H1Q8NG92 308 aa16.14■□□□□ 0.18
SMC4-201ENST00000344722 FAM122AQ96E09 287 aa16.14■□□□□ 0.18
SMC4-201ENST00000344722 OR51B4Q9Y5P0 310 aa16.14■□□□□ 0.18
SMC4-201ENST00000344722 Q6ZN92 141 aa16.14■□□□□ 0.17
SMC4-201ENST00000344722 FBXO17Q96EF6 278 aa16.14■□□□□ 0.17
SMC4-201ENST00000344722 FCN1O00602 326 aa16.14■□□□□ 0.17
SMC4-201ENST00000344722 IGHEP01854 428 aa16.14■□□□□ 0.17
SMC4-201ENST00000344722 FFAR4Q5NUL3 377 aa16.14■□□□□ 0.17
SMC4-201ENST00000344722 PRRT4C9JH25 899 aa16.14■□□□□ 0.17
SMC4-201ENST00000344722 ST6GAL1P15907 406 aa16.14■□□□□ 0.17
SMC4-201ENST00000344722 FAM53BQ14153 422 aa16.14■□□□□ 0.17
SMC4-201ENST00000344722 TBC1D28Q2M2D7 210 aa16.14■□□□□ 0.17
SMC4-201ENST00000344722 WDR73Q6P4I2 378 aa16.14■□□□□ 0.17
SMC4-201ENST00000344722 BHLHE23Q8NDY6 225 aa16.14■□□□□ 0.17
SMC4-201ENST00000344722 RGP1Q92546 391 aaPredicted RBP16.14■□□□□ 0.17
SMC4-201ENST00000344722 SLC38A11Q08AI6 406 aa16.14■□□□□ 0.17
SMC4-201ENST00000344722 DGAT2L6Q6ZPD8 337 aa16.14■□□□□ 0.17
SMC4-201ENST00000344722 PRSS50Q9UI38 385 aa16.14■□□□□ 0.17
SMC4-201ENST00000344722 AQP7P3A6NL99 342 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 TERTO14746 1132 aaKnown RBP16.13■□□□□ 0.17
SMC4-201ENST00000344722 ZNF154Q13106 437 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 NUMA1Q14980 2115 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 NKAIN2Q5VXU1 208 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 EXTL1Q92935 676 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 CEBPEQ15744 281 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 NPEPL1Q8NDH3 523 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 NEIL1Q96FI4 390 aaPredicted RBP16.13■□□□□ 0.17
SMC4-201ENST00000344722 KIAA1324LA8MWY0 1029 aaPredicted RBP16.13■□□□□ 0.17
SMC4-201ENST00000344722 CHRNA7P36544 502 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 OR3A4PP47883 348 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 SULT1A2P50226 295 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 ZNF296Q8WUU4 475 aaPredicted RBP16.13■□□□□ 0.17
SMC4-201ENST00000344722 ATP5SQ99766 215 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 IL17BQ9UHF5 180 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 G3V3Y1 287 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 CEACAM5P06731 702 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 ZDHHC23Q8IYP9 409 aa16.13■□□□□ 0.17
SMC4-201ENST00000344722 GPA33Q99795 319 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms