RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 SMOC1Q9H4F8 434 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 A0A1W2PPV9 198 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 A8MVM7 634 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 GPM6AP51674 278 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 PPIAP62937 165 aaKnown RBP6.96□□□□□ -1.3
KPNA1-201ENST00000344337 ZNF117Q03924 483 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 ZNF273Q14593 569 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 PRR31Q5SQ13 230 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 MKXQ8IYA7 352 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 TERB2Q8NHR7 220 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 ASB17Q8WXJ9 295 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 ELOVL1Q9BW60 279 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 SLC25A22Q9H936 323 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 MTCH1Q9NZJ7 389 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 IL17BQ9UHF5 180 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 BDP1A6H8Y1 2624 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 COL9A1P20849 921 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 PEBP1P30086 187 aaKnown RBP6.96□□□□□ -1.3
KPNA1-201ENST00000344337 HAAOP46952 286 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 PMS2P11Q13670 270 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 MESTQ5EB52 335 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 ZNF343Q6P1L6 599 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 PPP1R3BQ86XI6 285 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 ZNF595Q8IYB9 648 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 BTF3L4Q96K17 158 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 ARV1Q9H2C2 271 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 TP53TG5Q9Y2B4 290 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 PCNX2A6NKB5 2137 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 IGHV3-43A0A0B4J1X8 118 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 SLC17A2O00624 439 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 HNRNPA1P09651 372 aaKnown RBP eCLIP6.96□□□□□ -1.3
KPNA1-201ENST00000344337 IGHV3-43DP0DP04 118 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 EIF4EBP2Q13542 120 aaPredicted RBP6.96□□□□□ -1.3
KPNA1-201ENST00000344337 ACSM6Q6P461 480 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 SYT13Q7L8C5 426 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 LYZL2Q7Z4W2 148 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 RTN4RL2Q86UN3 420 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 FBXL14Q8N1E6 418 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 OTOSQ8NHW6 89 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 BSCL2Q96G97 398 aaPredicted RBP6.96□□□□□ -1.3
KPNA1-201ENST00000344337 GAR1Q9NY12 217 aaKnown RBP6.96□□□□□ -1.3
KPNA1-201ENST00000344337 ZMIZ1Q9ULJ6 1067 aa6.96□□□□□ -1.3
KPNA1-201ENST00000344337 EXOGQ9Y2C4 368 aaKnown RBP6.96□□□□□ -1.3
KPNA1-201ENST00000344337 TRAV1-2A0A0B4J238 106 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 ZNF320A2RRD8 509 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 OR5K3A6NET4 321 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 C3orf80F5H4A9 247 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 PIN1P1O15428 100 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 PSG6Q00889 435 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 C9orf50Q5SZB4 431 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 IL34Q6ZMJ4 242 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 MRPS24Q96EL2 167 aaKnown RBP6.95□□□□□ -1.3
KPNA1-201ENST00000344337 TXN2Q99757 166 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 RARRES2Q99969 163 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 CRYAAP02489 173 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 THY1P04216 161 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 GSK3AP49840 483 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 HFEQ30201 348 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 LDLRAD3Q86YD5 345 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 C1orf87Q8N0U7 546 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 OR10V1Q8NGI7 309 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 OR5C1Q8NGR4 320 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 ZCCHC4Q9H5U6 513 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 THAP10Q9P2Z0 257 aaPredicted RBP6.95□□□□□ -1.3
KPNA1-201ENST00000344337 NSG2Q9Y328 171 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 SF3B6Q9Y3B4 125 aaKnown RBP6.95□□□□□ -1.3
KPNA1-201ENST00000344337 USF3Q68DE3 2245 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 SNRPGP15A8MWD9 76 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 ENSAO43768 121 aaKnown RBP6.95□□□□□ -1.3
KPNA1-201ENST00000344337 C3AR1Q16581 482 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 HACD4Q5VWC8 232 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 BAHD1Q8TBE0 780 aaPredicted RBP6.95□□□□□ -1.3
KPNA1-201ENST00000344337 CPT1CQ8TCG5 803 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 ADAT3Q96EY9 351 aaPredicted RBP6.95□□□□□ -1.3
KPNA1-201ENST00000344337 C4orf45Q96LM5 186 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 NAA11Q9BSU3 229 aaPredicted RBP6.95□□□□□ -1.3
KPNA1-201ENST00000344337 LAT2Q9GZY6 243 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 SH3BGRL3Q9H299 93 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 RALGAPA2Q2PPJ7 1873 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 OR5K4A6NMS3 321 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 M0R135 149 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 ST8SIA3O43173 380 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 SPINT1O43278 529 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 AADACP22760 399 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 MYBPHQ13203 477 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 ZNF429Q86V71 674 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 OR5M9Q8NGP3 310 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 NAT6Q93015 286 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 MRPL24Q96A35 216 aaKnown RBP6.95□□□□□ -1.3
KPNA1-201ENST00000344337 ZNF799Q96GE5 643 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 SMIM7Q9BQ49 75 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 WDR13Q9H1Z4 485 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 KLK13Q9UKR3 277 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 RNF24Q9Y225 148 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 RFNGQ9Y644 331 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 CCDC187A0A096LP49 1063 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 ADAM20O43506 726 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 PTGER4P35408 488 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 TCL1AP56279 114 aa6.95□□□□□ -1.3
KPNA1-201ENST00000344337 C17orf67Q0P5P2 114 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms