RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 FAM189A2Q15884 450 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 TUSC1Q2TAM9 212 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 CEACAM16Q2WEN9 425 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 CHRFAM7AQ494W8 412 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 BOLLQ8N9W6 283 aaKnown RBP12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 OR1F12Q8NHA8 337 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 FGFBP3Q8TAT2 258 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 CDC6Q99741 560 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 SF3B5Q9BWJ5 86 aaKnown RBP12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 PLEKHJ1Q9NW61 149 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 B4E171 279 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 SYNGR3O43761 229 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 APOC1P02654 83 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 SERPINA5P05154 406 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 CRYGSP22914 178 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 TSPAN7P41732 249 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 SRYQ05066 204 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 AADACL3Q5VUY0 350 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 ELP2Q6IA86 826 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 TMEM17Q86X19 198 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 BHLHE23Q8NDY6 225 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 OR52H1Q8NGJ2 320 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 OR2V1Q8NHB1 315 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 RTBDNQ9BSG5 229 aaPredicted RBP12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 MS4A7Q9GZW8 240 aaPredicted RBP12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 PPA2Q9H2U2 334 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 GHRLQ9UBU3 117 aa12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 DSPP15924 2871 aaKnown RBP12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 EP300Q09472 2414 aaPredicted RBP12.99□□□□□ -0.33
VIPAS39-202ENST00000343765 FOXI3A8MTJ6 420 aaPredicted RBP12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 SIGLEC5O15389 551 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 CRHP06850 196 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 PGAM2P15259 253 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 FPR2P25090 351 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 PSMB6P28072 239 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 CBX5P45973 191 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 CYB561P49447 251 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 CLDN15P56746 228 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 SIGLEC14Q08ET2 396 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 ZNF345Q14585 488 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 TAF9Q16594 264 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 ANKRD55Q3KP44 614 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 RAB11FIP2Q7L804 512 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 PXT1Q8NFP0 134 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 KCNE4Q8WWG9 221 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 KIAA1549Q9HCM3 1950 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 DBX1A6NMT0 343 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 B8ZZF3 427 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 SFT2D2O95562 160 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 HPP00738 406 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 IGHEP01854 428 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 ICAM2P13598 275 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 TAS2R46P59540 309 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 SUPT4H1P63272 117 aaKnown RBP12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 RSU1Q15404 277 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 C9orf135Q5VTT2 229 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 BRICD5Q6PL45 260 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 DRAM2Q6UX65 266 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 BATF2Q8N1L9 274 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 FOXB1Q99853 325 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 ARRDC1-AS1Q9H2J1 176 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 IGKV1-27A0A075B6S5 117 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 ZNF205O95201 554 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 CSTBP04080 98 aaKnown RBP12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 JMJD7P0C870 316 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 ALDH3B1P43353 468 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 PSG4Q00888 419 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 SLC16A14Q7RTX9 510 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 STPG2Q8N412 459 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 BVESQ8NE79 360 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 DYRK2Q92630 601 aa12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 THOC3Q96J01 351 aaKnown RBP12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 METTL8Q9H825 291 aaKnown RBP12.98□□□□□ -0.33
VIPAS39-202ENST00000343765 DHRS7CA6NNS2 312 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 CST2P09228 141 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 ACP1P24666 158 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 RIPPLY1Q0D2K3 151 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 SCRN3Q0VDG4 424 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 OR5AP2Q8NGF4 316 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 FAAP24Q9BTP7 215 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 MED9Q9NWA0 146 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 RASL12Q9NYN1 266 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 OSGIN2Q9Y236 505 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 SERPINE3A8MV23 424 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 A8MXK9 166 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 HOXB5P09067 269 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 RRADP55042 308 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 SSPNQ14714 243 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 TM2D1Q9BX74 207 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 HES7Q9BYE0 225 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 SLC25A32Q9H2D1 315 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 ACKR4Q9NPB9 350 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 LRFN1Q9P244 771 aa12.97□□□□□ -0.33
VIPAS39-202ENST00000343765 PCSK5Q92824 1860 aa12.96□□□□□ -0.33
VIPAS39-202ENST00000343765 GP1BAP07359 652 aa12.96□□□□□ -0.33
VIPAS39-202ENST00000343765 FGF2P09038 288 aa12.96□□□□□ -0.33
VIPAS39-202ENST00000343765 HOXD11P31277 338 aaPredicted RBP12.96□□□□□ -0.33
VIPAS39-202ENST00000343765 OPRM1P35372 400 aa12.96□□□□□ -0.33
VIPAS39-202ENST00000343765 PDCD1Q15116 288 aa12.96□□□□□ -0.33
VIPAS39-202ENST00000343765 GLRX5Q86SX6 157 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms