RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 NCK1P16333 377 aa13.03□□□□□ -0.32
NECTIN1-202ENST00000340882 CD24P25063 80 aa13.03□□□□□ -0.32
NECTIN1-202ENST00000340882 THBS3P49746 956 aa13.03□□□□□ -0.32
NECTIN1-202ENST00000340882 KLF10Q13118 480 aa13.03□□□□□ -0.32
NECTIN1-202ENST00000340882 SLC15A3Q8IY34 581 aa13.03□□□□□ -0.32
NECTIN1-202ENST00000340882 OR4X2Q8NGF9 303 aa13.03□□□□□ -0.32
NECTIN1-202ENST00000340882 C7orf34Q96L11 122 aa13.03□□□□□ -0.32
NECTIN1-202ENST00000340882 ZNF488Q96MN9 340 aa13.03□□□□□ -0.32
NECTIN1-202ENST00000340882 AMELYQ99218 206 aa13.03□□□□□ -0.32
NECTIN1-202ENST00000340882 OR51I2Q9H344 312 aa13.03□□□□□ -0.32
NECTIN1-202ENST00000340882 IDH3BO43837 385 aa13.02□□□□□ -0.33
NECTIN1-202ENST00000340882 ZFPL1O95159 310 aa13.02□□□□□ -0.33
NECTIN1-202ENST00000340882 CST4P01036 141 aa13.02□□□□□ -0.33
NECTIN1-202ENST00000340882 RHCEP18577 417 aa13.02□□□□□ -0.33
NECTIN1-202ENST00000340882 GRB2P62993 217 aaKnown RBP13.02□□□□□ -0.33
NECTIN1-202ENST00000340882 LIPEQ05469 1076 aa13.02□□□□□ -0.33
NECTIN1-202ENST00000340882 SLC34A1Q06495 639 aa13.02□□□□□ -0.33
NECTIN1-202ENST00000340882 ABCA11PQ4W5N1 156 aa13.02□□□□□ -0.33
NECTIN1-202ENST00000340882 ACP7Q6ZNF0 438 aa13.02□□□□□ -0.33
NECTIN1-202ENST00000340882 FAM86B1Q8N7N1 296 aa13.02□□□□□ -0.33
NECTIN1-202ENST00000340882 OR11H6Q8NGC7 330 aa13.02□□□□□ -0.33
NECTIN1-202ENST00000340882 EGLN3Q9H6Z9 239 aa13.02□□□□□ -0.33
NECTIN1-202ENST00000340882 hCG_1809904A0A1W2PP81 198 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 A0A1W2PPE2 198 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 A0A1W2PPH5 198 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 A0A1W2PR64 198 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 A0A1W2PRV1 198 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 BBIP1A8MTZ0 92 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 AMY1AP04745 511 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 AMY2AP04746 511 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 CLUP10909 449 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 HSD11B1P28845 292 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 DYNC1I2Q13409 638 aaKnown RBP13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 DOC2BQ14184 412 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 EIF2B1Q14232 305 aaKnown RBP13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 TEX30Q5JUR7 227 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 METTL21CQ5VZV1 264 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 ZNF770Q6IQ21 691 aaPredicted RBP13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 TIGD4Q8IY51 512 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 SLC37A3Q8NCC5 494 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 OR52H1Q8NGJ2 320 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 OR2T4Q8NH00 348 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 OR10A2Q9H208 303 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 GID8Q9NWU2 228 aa13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 FAM32AQ9Y421 112 aaKnown RBP13.01□□□□□ -0.33
NECTIN1-202ENST00000340882 ZNF732B4DXR9 585 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 NME4O00746 187 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 GSTA4O15217 222 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 CFL1P23528 166 aaKnown RBP13□□□□□ -0.33
NECTIN1-202ENST00000340882 PRDX2P32119 198 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 SLC15A1P46059 708 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 GSSP48637 474 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 OR12D2P58182 307 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 CEP78Q5JTW2 689 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 C8orf86Q6ZUL3 223 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 ZDHHC23Q8IYP9 409 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 BATF2Q8N1L9 274 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 ZNF561Q8N587 486 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 OR13D1Q8NGV5 346 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 BCAS4Q8TDM0 211 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 AQP3Q92482 292 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 PGAM5Q96HS1 289 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 MCRIP2Q9BUT9 160 aaKnown RBP13□□□□□ -0.33
NECTIN1-202ENST00000340882 ABHD6Q9BV23 337 aa13□□□□□ -0.33
NECTIN1-202ENST00000340882 KRCC1Q9NPI7 259 aaPredicted RBP13□□□□□ -0.33
NECTIN1-202ENST00000340882 AZGP1P25311 298 aaKnown RBP12.99□□□□□ -0.33
NECTIN1-202ENST00000340882 FMO3P31513 532 aa12.99□□□□□ -0.33
NECTIN1-202ENST00000340882 LCN8Q6JVE9 175 aa12.99□□□□□ -0.33
NECTIN1-202ENST00000340882 UNQ9370/PRO34162Q6UXP9 181 aa12.99□□□□□ -0.33
NECTIN1-202ENST00000340882 TCF23Q7RTU1 214 aa12.99□□□□□ -0.33
NECTIN1-202ENST00000340882 CALHM1Q8IU99 346 aa12.99□□□□□ -0.33
NECTIN1-202ENST00000340882 RNF133Q8WVZ7 376 aa12.99□□□□□ -0.33
NECTIN1-202ENST00000340882 DYDC1Q8WWB3 177 aa12.99□□□□□ -0.33
NECTIN1-202ENST00000340882 RCN3Q96D15 328 aa12.99□□□□□ -0.33
NECTIN1-202ENST00000340882 DUX3Q96PT4 197 aa12.99□□□□□ -0.33
NECTIN1-202ENST00000340882 OR8B4Q96RC9 309 aa12.99□□□□□ -0.33
NECTIN1-202ENST00000340882 P2RX4Q99571 388 aa12.99□□□□□ -0.33
NECTIN1-202ENST00000340882 C1orf21Q9H246 121 aa12.99□□□□□ -0.33
NECTIN1-202ENST00000340882 CD300AQ9UGN4 299 aa12.99□□□□□ -0.33
NECTIN1-202ENST00000340882 EDF1O60869 148 aaKnown RBP12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 TK1P04183 234 aa12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 SNRNP70P08621 437 aaKnown RBP12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 IGHV1-8P0DP01 117 aa12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 OPRL1P41146 370 aa12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 LUMP51884 338 aaPredicted RBP12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 RPL23AP62750 156 aaKnown RBP12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 SF3A3Q12874 501 aaKnown RBP eCLIP12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 CRMP1Q14194 572 aa12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 HAGHLQ6PII5 290 aaPredicted RBP12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 ZNF329Q86UD4 541 aa12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 FTMTQ8N4E7 242 aa12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 OR8D4Q8NGM9 314 aa12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 FAM162AQ96A26 154 aa12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 NMNAT2Q9BZQ4 307 aa12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 ABCB9Q9NP78 766 aa12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 SAR1AQ9NR31 198 aa12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 TBC1D23Q9NUY8 699 aa12.98□□□□□ -0.33
NECTIN1-202ENST00000340882 SLC1A7O00341 560 aa12.97□□□□□ -0.33
NECTIN1-202ENST00000340882 SLC22A2O15244 555 aa12.97□□□□□ -0.33
NECTIN1-202ENST00000340882 ZNF728P0DKX0 622 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms