RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 DUX4L4P0CJ87 422 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 DUX4L5P0CJ88 424 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 DUX4L6P0CJ89 424 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 DUX4L7P0CJ90 424 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FCGR2AP12318 317 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ZNF32P17041 273 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 LHX2P50458 406 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PSG4Q00888 419 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 C1QTNF12Q5T7M4 302 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TMEM164Q5U3C3 297 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 STOML3Q8TAV4 291 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 RBPMSQ93062 196 aaKnown RBP9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 BCO1Q9HAY6 547 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 LRFN1Q9P244 771 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 DUX4Q9UBX2 424 aa9.34□□□□□ -0.91
TRAF3IP2-201ENST00000340026 A0A1W2PP11 408 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 A8MXK9 166 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 M0R296 226 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PMP2P02689 132 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 DBHP09172 617 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 RPS2P15880 293 aaKnown RBP9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ZNF708P17019 499 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ACKR3P25106 362 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 BLVRBP30043 206 aaPredicted RBP9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 FUT6P51993 359 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 NAAAQ02083 359 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 OC90Q02509 493 aaPredicted RBP9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SRSF7Q16629 238 aaKnown RBP eCLIP9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PPP1R1CQ8WVI7 109 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 RTBDNQ9BSG5 229 aaPredicted RBP9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PINLYPA6NC86 204 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SS18L1O75177 396 aaPredicted RBP9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 AMY2BP19961 511 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ZP3P21754 424 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 GDF1P27539 372 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 RBP2P50120 134 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 CLDN18P56856 261 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 HGFACQ04756 655 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 IL15RAQ13261 267 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 WIPI1Q5MNZ9 446 aaPredicted RBP9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ZNF774Q6NX45 483 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 DPPA2Q7Z7J5 298 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ADAD2Q8NCV1 583 aaKnown RBP9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 OR13G1Q8NGZ3 307 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 COQ8AQ8NI60 647 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 MARCH1Q8TCQ1 289 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ST8SIA2Q92186 375 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PIGTQ969N2 578 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ARRDC1-AS1Q9H2J1 176 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 RASL12Q9NYN1 266 aa9.33□□□□□ -0.92
TRAF3IP2-201ENST00000340026 DOCK10Q96BY6 2186 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 KRBOX1C9JBD0 128 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 F8VVB4 439 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 F8VWA3 439 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 FARS2O95363 451 aaKnown RBP9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 CRYZL1O95825 349 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 FGF2P09038 288 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SNU13P55769 128 aaKnown RBP9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 FAM3AP98173 230 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 AIMP2Q13155 320 aaKnown RBP9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ARFRP1Q13795 201 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 CEACAM16Q2WEN9 425 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 C17orf107Q6ZR85 190 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 Q6ZS49 121 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SAXO1Q8IYX7 474 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 LRRC20Q8TCA0 184 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 THOC3Q96J01 351 aaKnown RBP9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PPA2Q9H2U2 334 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 OPA3Q9H6K4 179 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 GP6Q9HCN6 339 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 TNRC6AQ8NDV7 1962 aaKnown RBP9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 A0A1W2PNU3 283 aaPredicted RBP9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PSMB6P28072 239 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SOX8P57073 446 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SUPT4H1P63272 117 aaKnown RBP9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SFRP5Q5T4F7 317 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ABHD17BQ5VST6 288 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 RPUSD3Q6P087 351 aaKnown RBP9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 DHRS11Q6UWP2 260 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 MOB3CQ70IA8 216 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 KCNMB2Q9Y691 235 aa9.32□□□□□ -0.92
TRAF3IP2-201ENST00000340026 TEX13DA0A0J9YY54 714 aaPredicted RBP9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ZNF816-ZNF321PA0A0X1KG74 233 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 KANTRA0A1W2PQU2 76 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 CDX4O14627 284 aaPredicted RBP9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 CTSDP07339 412 aaPredicted RBP9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 OR3A2P47893 321 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 HTR5AP47898 357 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 MTCP1P56278 107 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 DCAF10Q5QP82 559 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 RTN4RL2Q86UN3 420 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PDZD9Q8IXQ8 264 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 OR1S1Q8NH92 325 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 THAP6Q8TBB0 222 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ROBO4Q8WZ75 1007 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 PDCD10Q9BUL8 212 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ACKR4Q9NPB9 350 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 SDHAF2Q9NX18 166 aa9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 ZNF230Q9UIE0 474 aaPredicted RBP9.31□□□□□ -0.92
TRAF3IP2-201ENST00000340026 CSN2P05814 226 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms