RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 CLEC18BQ6UXF7 455 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 BAP18Q8IXM2 172 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 LINC00518Q8N0U6 118 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 FBXL14Q8N1E6 418 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 OR5M8Q8NGP6 311 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 OR1S1Q8NH92 325 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 THRSPQ92748 146 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 RASL10BQ96S79 203 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 ADAM19Q9H013 955 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 LDAHQ9H6V9 325 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 PLA2G3Q9NZ20 509 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 MIOXQ9UGB7 285 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 SIT1Q9Y3P8 196 aa10.55□□□□□ -0.72
USP1-201ENST00000339950 HEATR1Q9H583 2144 aaKnown RBP10.54□□□□□ -0.72
USP1-201ENST00000339950 BLACEA4D250 179 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 LILRA5A6NI73 299 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 TSPAN2O60636 221 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 RAD51DO75771 328 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 CST7O76096 145 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 ONECUT2O95948 504 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 PDGFBP01127 241 aaPredicted RBP10.54□□□□□ -0.72
USP1-201ENST00000339950 NXPH1P58417 271 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 OR2A2Q6IF42 318 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 SLC22A25Q6T423 547 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 EXD3Q8N9H8 876 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 LRRC75AQ8NAA5 344 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 TMEM229BQ8NBD8 167 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 LILRB1Q8NHL6 650 aaPredicted RBP10.54□□□□□ -0.72
USP1-201ENST00000339950 LRFN5Q96NI6 719 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 PRO1933Q9H354 126 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 FRYQ5TBA9 3013 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 OR2M5A3KFT3 312 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 G3V3Q6 166 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 CRYBA1P05813 215 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 TRIM61Q5EBN2 209 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 ZNF813Q6ZN06 617 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 Q6ZRG5 221 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.54□□□□□ -0.72
USP1-201ENST00000339950 HIST1H2AAQ96QV6 131 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 TAF9BQ9HBM6 251 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 SPACA1Q9HBV2 294 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 ZFP57Q9NU63 452 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 ZNF581Q9P0T4 197 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 SULT1C2O00338 296 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 SLC34A2O95436 690 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 IGKV3-11P04433 115 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 OR5H8P0DN80 308 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 FCGR2CP31995 323 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 SRSF3P84103 164 aaKnown RBP10.54□□□□□ -0.72
USP1-201ENST00000339950 ZXDAP98168 799 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 SLC25A26Q70HW3 274 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 P4HTMQ9NXG6 502 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 B3GALT5Q9Y2C3 310 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 WIF1Q9Y5W5 379 aa10.54□□□□□ -0.72
USP1-201ENST00000339950 LIPT2A6NK58 231 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 HSD17B6O14756 317 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 IFNA17P01571 189 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 ARG1P05089 322 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 HOXC4P09017 264 aaPredicted RBP10.53□□□□□ -0.72
USP1-201ENST00000339950 PIGPP57054 158 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 HLA-BQ31612 363 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 SLC36A1Q7Z2H8 476 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 SLC43A2Q8N370 569 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 FAM24BQ8N5W8 94 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 RHBDD1Q8TEB9 315 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 LURAP1Q96LR2 239 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 PHF7Q9BWX1 381 aaPredicted RBP10.53□□□□□ -0.72
USP1-201ENST00000339950 SLC7A11Q9UPY5 501 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 NCOA6Q14686 2063 aaPredicted RBP10.53□□□□□ -0.72
USP1-201ENST00000339950 TRBV5-7A0A0A0MS05 114 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 ZNF44P15621 663 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 ALDH3B1P43353 468 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 FHITP49789 147 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 IDH3GP51553 393 aaPredicted RBP10.53□□□□□ -0.72
USP1-201ENST00000339950 PIGYQ3MUY2 71 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 NAXDQ8IW45 347 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 SPTSSAQ969W0 71 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 SMCO4Q9NRQ5 59 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 FREM2Q5SZK8 3169 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 HMSDA8MTL9 139 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 BCL2L11O43521 198 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 CARD18P57730 90 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 ARF1P84077 181 aaKnown RBP10.53□□□□□ -0.72
USP1-201ENST00000339950 ACTBL2Q562R1 376 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.53□□□□□ -0.72
USP1-201ENST00000339950 HIST2H3AQ71DI3 136 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 NKAIN3Q8N8D7 197 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 OR11L1Q8NGX0 322 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 SFT2D1Q8WV19 159 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 ZNF501Q96CX3 271 aaPredicted RBP10.53□□□□□ -0.72
USP1-201ENST00000339950 SPACA9Q96E40 222 aaPredicted RBP10.53□□□□□ -0.72
USP1-201ENST00000339950 OR10C1Q96KK4 312 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 CMTM3Q96MX0 182 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 OR14J1Q9UGF5 321 aa10.53□□□□□ -0.72
USP1-201ENST00000339950 TRAV14DV4A0A0A6YYC5 116 aa10.52□□□□□ -0.72
USP1-201ENST00000339950 BORCS7-ASMTA0A0B4J1R7 106 aa10.52□□□□□ -0.72
USP1-201ENST00000339950 PRR19A6NJB7 356 aa10.52□□□□□ -0.72
USP1-201ENST00000339950 CDC14BO60729 498 aa10.52□□□□□ -0.72
USP1-201ENST00000339950 DXOO77932 396 aaKnown RBP10.52□□□□□ -0.72
USP1-201ENST00000339950 OR2A4O95047 310 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms