RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 ACY1Q03154 408 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 ICAM4Q14773 271 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 TMEM176BQ3YBM2 270 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-201ENST00000339754 GLIPR1L1Q6UWM5 242 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 GRASPQ7Z6J2 395 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-201ENST00000339754 NAXEQ8NCW5 288 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 SLC25A36Q96CQ1 311 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 SPACA5Q96QH8 159 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 FOXQ1Q9C009 403 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 BANF2Q9H503 90 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 PHPT1Q9NRX4 125 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-201ENST00000339754 EHFQ9NZC4 300 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 SLC17A4Q9Y2C5 497 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 NOTCH4Q99466 2003 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 METTL12A8MUP2 240 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 CDC14BO60729 498 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 NSA2O95478 260 aaKnown RBP8.28□□□□□ -1.08
NECAP1-201ENST00000339754 TTRP02766 147 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 CEBPGP53567 150 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 SNU13P55769 128 aaKnown RBP8.28□□□□□ -1.08
NECAP1-201ENST00000339754 CSNK2A1P68400 391 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-201ENST00000339754 TMEM183AQ8IXX5 376 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 CYB561D1Q8N8Q1 229 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 CSNK2A3Q8NEV1 391 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 SCARF2Q96GP6 870 aaPredicted RBP8.28□□□□□ -1.08
NECAP1-201ENST00000339754 SNX22Q96L94 193 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 TBC1D29Q9UFV1 150 aa8.28□□□□□ -1.08
NECAP1-201ENST00000339754 C14orf166Q9Y224 244 aaKnown RBP8.28□□□□□ -1.08
NECAP1-201ENST00000339754 LINC01553A4QN01 128 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 XRCC2O43543 280 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 SCAF4O95104 1147 aaKnown RBP8.27□□□□□ -1.08
NECAP1-201ENST00000339754 WISP1O95388 367 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 MBP02144 154 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 ZNF25P17030 456 aaPredicted RBP8.27□□□□□ -1.08
NECAP1-201ENST00000339754 PCP4P48539 62 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 MMP16P51512 607 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 RND2P52198 227 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 GLO1Q04760 184 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.27□□□□□ -1.08
NECAP1-201ENST00000339754 COL13A1Q5TAT6 717 aaPredicted RBP8.27□□□□□ -1.08
NECAP1-201ENST00000339754 GALNTL5Q7Z4T8 443 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 SLC35E3Q7Z769 313 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 C7orf61Q8IZ16 206 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 GPR137CQ8N3F9 429 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 OR5D14Q8NGL3 314 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 OR10J5Q8NHC4 309 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 C16orf52Q8NHV5 167 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.27□□□□□ -1.08
NECAP1-201ENST00000339754 KIAA1456Q9P272 454 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 LIPGQ9Y5X9 500 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 HEBP2Q9Y5Z4 205 aa8.27□□□□□ -1.08
NECAP1-201ENST00000339754 MUC22E2RYF6 1773 aaPredicted RBP8.27□□□□□ -1.09
NECAP1-201ENST00000339754 FAM221BA6H8Z2 402 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 CRYM-AS1A6NIL9 109 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 CDRT15L2A8MXV6 281 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 TGOLN2O43493 480 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 DIRAS3O95661 229 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 GIMD1P0DJR0 217 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 PNLIPP16233 465 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 RGS19P49795 217 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 FOXF1Q12946 379 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 ARFRP1Q13795 201 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 PDGFRLQ15198 375 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 LINC00346Q8IVM7 164 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 ARHGEF39Q8N4T4 335 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 ARL6IP6Q8N6S5 226 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 PLPP5Q8NEB5 264 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 OR8G5Q8NG78 346 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 KCNG3Q8TAE7 436 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 FAM3CQ92520 227 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 SLC22A18Q96BI1 424 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 R3HDM4Q96D70 268 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 SHDQ96IW2 340 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 ZFYVE21Q9BQ24 234 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 NIPSNAP3BQ9BS92 247 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 GPR87Q9BY21 358 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 TXNIPQ9H3M7 391 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 CERS4Q9HA82 394 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 CDH20Q9HBT6 801 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 FAM206AQ9NX38 181 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 MRPS28Q9Y2Q9 187 aaKnown RBP8.27□□□□□ -1.09
NECAP1-201ENST00000339754 MYO7AQ13402 2215 aa8.27□□□□□ -1.09
NECAP1-201ENST00000339754 TRBV23OR9-2A0A075B6M9 112 aa8.26□□□□□ -1.09
NECAP1-201ENST00000339754 GEMIN2O14893 280 aaKnown RBP8.26□□□□□ -1.09
NECAP1-201ENST00000339754 HSPB1P04792 205 aaKnown RBP8.26□□□□□ -1.09
NECAP1-201ENST00000339754 FUT3P21217 361 aa8.26□□□□□ -1.09
NECAP1-201ENST00000339754 GJA4P35212 333 aa8.26□□□□□ -1.09
NECAP1-201ENST00000339754 GPR3P46089 330 aa8.26□□□□□ -1.09
NECAP1-201ENST00000339754 OR3A4PP47883 348 aa8.26□□□□□ -1.09
NECAP1-201ENST00000339754 TAS2R46P59540 309 aa8.26□□□□□ -1.09
NECAP1-201ENST00000339754 FZD2Q14332 565 aa8.26□□□□□ -1.09
NECAP1-201ENST00000339754 KIR2DS3Q14952 304 aa8.26□□□□□ -1.09
NECAP1-201ENST00000339754 RAB35Q15286 201 aa8.26□□□□□ -1.09
NECAP1-201ENST00000339754 TCEA2Q15560 299 aa8.26□□□□□ -1.09
NECAP1-201ENST00000339754 ZNF506Q5JVG8 444 aa8.26□□□□□ -1.09
NECAP1-201ENST00000339754 AGBL4Q5VU57 503 aa8.26□□□□□ -1.09
NECAP1-201ENST00000339754 PSRC1Q6PGN9 363 aaPredicted RBP8.26□□□□□ -1.09
NECAP1-201ENST00000339754 C9orf40Q8IXQ3 194 aa8.26□□□□□ -1.09
NECAP1-201ENST00000339754 OR5AS1Q8N127 324 aa8.26□□□□□ -1.09
NECAP1-201ENST00000339754 DNASE2BQ8WZ79 361 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms