RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 CDSNQ15517 529 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 MSMPQ1L6U9 139 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 OLFML2AQ68BL7 652 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 FBXW12Q6X9E4 464 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 CDH26Q8IXH8 852 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 PNLDC1Q8NA58 520 aaKnown RBP3.55□□□□□ -1.84
MCF2-201ENST00000338585 ST6GALNAC3Q8NDV1 305 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 OR5L1Q8NGL2 311 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 SETD6Q8TBK2 473 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 RND1Q92730 232 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 PTX4Q96A99 478 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 PHF21AQ96BD5 680 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 MARS2Q96GW9 593 aaKnown RBP3.55□□□□□ -1.84
MCF2-201ENST00000338585 ZC3HAV1LQ96H79 300 aaKnown RBP3.55□□□□□ -1.84
MCF2-201ENST00000338585 VKORC1Q9BQB6 163 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 TMEM59Q9BXS4 323 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 MMP28Q9H239 520 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 PIGMQ9H3S5 423 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 HEATR1Q9H583 2144 aaKnown RBP3.55□□□□□ -1.84
MCF2-201ENST00000338585 OBP2BQ9NPH6 170 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 JKAMPQ9P055 326 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 RAB22AQ9UL26 194 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 NBEAQ8NFP9 2946 aa3.55□□□□□ -1.84
MCF2-201ENST00000338585 ZNF732B4DXR9 585 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 C16orf97H3BN30 126 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 GABARAPH6UMI1 98 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 CCL21O00585 134 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 PEX14O75381 377 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 MT-ND4P03905 459 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 SFTPBP07988 381 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 MGMTP16455 207 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 GNB3P16520 340 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 BTCP35070 178 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 RBMXP38159 391 aaKnown RBP3.54□□□□□ -1.84
MCF2-201ENST00000338585 ALDH3B1P43353 468 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 FABP6P51161 128 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 FUT6P51993 359 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 ATP1B3P54709 279 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 PSG7Q13046 419 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 PDZK1IP1Q13113 114 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 KLF9Q13886 244 aaPredicted RBP3.54□□□□□ -1.84
MCF2-201ENST00000338585 CARTPTQ16568 116 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 PLAC9Q5JTB6 97 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 ZBTB37Q5TC79 503 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 FAAP20Q6NZ36 180 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 DNM1P46Q6ZS02 220 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 LHFPL2Q6ZUX7 228 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 SLC25A26Q70HW3 274 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 OR2W3Q7Z3T1 314 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 ZDHHC23Q8IYP9 409 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 TOMM5Q8N4H5 51 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 CHST4Q8NCG5 386 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 CSNK2A3Q8NEV1 391 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 KCNG3Q8TAE7 436 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 KLF14Q8TD94 323 aaPredicted RBP3.54□□□□□ -1.84
MCF2-201ENST00000338585 FCAMRQ8WWV6 532 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 MUCL1Q96DR8 90 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 ITPKCQ96DU7 683 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 RADILQ96JH8 1075 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 SELENOIQ9C0D9 397 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 SLC22A4Q9H015 551 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 NLKQ9UBE8 527 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 FBLN5Q9UBX5 448 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 SLC7A11Q9UPY5 501 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 KCNK7Q9Y2U2 307 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 ESPL1Q14674 2120 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 RELNP78509 3460 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 METTL21EPA6NDL7 271 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 ANKRD30BLA7E2S9 258 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 ATP6V1G2-DDX39BF2Z307 99 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 F8VVB4 439 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 F8VWA3 439 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 H0YL77 283 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 J3QW42 95 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 ERVH48-1M5A8F1 160 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 HTR3BO95264 441 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 THBDP07204 575 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 UBBP0CG47 229 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 RAC2P15153 192 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 SELEP16581 610 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 PRSS3P35030 304 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 HAAOP46952 286 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 NPBWR2P48146 333 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 CAPZA1P52907 286 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 CASP6P55212 293 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 TMEM50BP56557 158 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 RPS27AP62979 156 aaKnown RBP3.54□□□□□ -1.84
MCF2-201ENST00000338585 PDCD1Q15116 288 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 RSU1Q15404 277 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 CEACAM21Q3KPI0 293 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 PIGYQ3MUY2 71 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 ZNF260Q3ZCT1 412 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 CDNFQ49AH0 187 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 SFRP4Q6FHJ7 346 aaPredicted RBP3.54□□□□□ -1.84
MCF2-201ENST00000338585 Q6ZTK2 550 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 WDR86Q86TI4 376 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 FJX1Q86VR8 437 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 LRP11Q86VZ4 500 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 WFDC8Q8IUA0 241 aa3.54□□□□□ -1.84
MCF2-201ENST00000338585 ZNF611Q8N823 705 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms