RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 NPY4RP50391 375 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 RRADP55042 308 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 POU4F3Q15319 338 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 HACD4Q5VWC8 232 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 TMEM65Q6PI78 240 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 C3P1Q6ZMU1 363 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 ZNF100Q8IYN0 542 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 ADAD2Q8NCV1 583 aaKnown RBP10.95□□□□□ -0.66
LIMK1-201ENST00000336180 ZFAND1Q8TCF1 268 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 TMEM68Q96MH6 324 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 COPZ2Q9P299 210 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 NBASA2RRP1 2371 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 LOC390937A0A1W2PQ73 354 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 I3L521 148 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 CYTIPO60759 359 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 GLI4P10075 376 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 MGMTP16455 207 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 FKBP2P26885 142 aaKnown RBP10.95□□□□□ -0.66
LIMK1-201ENST00000336180 ERP29P30040 261 aaKnown RBP10.95□□□□□ -0.66
LIMK1-201ENST00000336180 PTGFRP43088 359 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 H2BFSP57053 126 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 RBMS2Q15434 407 aaKnown RBP10.95□□□□□ -0.66
LIMK1-201ENST00000336180 RNASE10Q5GAN6 216 aaKnown RBP10.95□□□□□ -0.66
LIMK1-201ENST00000336180 CD276Q5ZPR3 534 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 MOB3CQ70IA8 216 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 S100A13Q99584 98 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 TMPRSS13Q9BYE2 586 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 OR10A2Q9H208 303 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 SLCO5A1Q9H2Y9 848 aa10.95□□□□□ -0.66
LIMK1-201ENST00000336180 ZNF780AO75290 641 aaPredicted RBP10.94□□□□□ -0.66
LIMK1-201ENST00000336180 DUSP1P28562 367 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 OPRM1P35372 400 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 FAUP35544 74 aaKnown RBP10.94□□□□□ -0.66
LIMK1-201ENST00000336180 HOXA4Q00056 320 aaPredicted RBP10.94□□□□□ -0.66
LIMK1-201ENST00000336180 SLC10A1Q14973 349 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 KCTD9Q7L273 389 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 OR13C8Q8NGS7 320 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 FER1L6-AS2Q96M78 137 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 C7orf50Q9BRJ6 194 aaKnown RBP10.94□□□□□ -0.66
LIMK1-201ENST00000336180 SLC17A5Q9NRA2 495 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 GPR160Q9UJ42 338 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 VSIG4Q9Y279 399 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 PCNX1Q96RV3 2341 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 IGKV1D-8A0A087WSZ0 117 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 FXYD6-FXYD2A0A087WZ82 144 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 G3V3Q6 166 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 TAS2R19P59542 299 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 TCF15Q12870 199 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 EIF3IQ13347 325 aaKnown RBP10.94□□□□□ -0.66
LIMK1-201ENST00000336180 BTN1A1Q13410 526 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 PIGYQ3MUY2 71 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 PDSS1Q5T2R2 415 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 THRSPQ92748 146 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 FXYD6Q9H0Q3 95 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 ROS1P08922 2347 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 A0A1B0GWJ7 208 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 TMEM82A0PJX8 343 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 OR2AT4A6NND4 320 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 TMEM14DPA8MWL7 114 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 CLN5O75503 358 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 G0S2P27469 103 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 MRPS10P82664 201 aaKnown RBP10.94□□□□□ -0.66
LIMK1-201ENST00000336180 LGALSLQ3ZCW2 172 aaPredicted RBP10.94□□□□□ -0.66
LIMK1-201ENST00000336180 BEX5Q5H9J7 111 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 ATPAF1Q5TC12 328 aaPredicted RBP10.94□□□□□ -0.66
LIMK1-201ENST00000336180 SEMA6DQ8NFY4 1073 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 MARCH1Q8TCQ1 289 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 AQP3Q92482 292 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 SF3B5Q9BWJ5 86 aaKnown RBP10.94□□□□□ -0.66
LIMK1-201ENST00000336180 PAPOLGQ9BWT3 736 aaKnown RBP10.94□□□□□ -0.66
LIMK1-201ENST00000336180 ACTR6Q9GZN1 396 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 ZNF224Q9NZL3 707 aa10.94□□□□□ -0.66
LIMK1-201ENST00000336180 MEIKINA0A087WXM9 373 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 ZNF850A8MQ14 1090 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 LILRA1O75019 489 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 BPNT1O95861 308 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 CRYGSP22914 178 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 NOVA1P51513 510 aaKnown RBP10.93□□□□□ -0.66
LIMK1-201ENST00000336180 ZNF680Q8NEM1 530 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 HS3ST6Q96QI5 342 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 SLA2Q9H6Q3 261 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 MOB1AQ9H8S9 216 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 B3GNT2Q9NY97 397 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 MCTS1Q9ULC4 181 aaKnown RBP10.93□□□□□ -0.66
LIMK1-201ENST00000336180 TTLL8A6PVC2 850 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 ARPC5O15511 151 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 ZNF735P0CB33 412 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 CD46P15529 392 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 ZNF708P17019 499 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 ACTBP60709 375 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 ACTG1P63261 375 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 CLN3Q13286 438 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 RAB35Q15286 201 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 PLCXD3Q63HM9 321 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 SLC36A1Q7Z2H8 476 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 CPT1CQ8TCG5 803 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 CA5BP1Q8WTZ4 195 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 MRGPRFQ96AM1 343 aa10.93□□□□□ -0.66
LIMK1-201ENST00000336180 FOXRED1Q96CU9 486 aaPredicted RBP10.93□□□□□ -0.66
LIMK1-201ENST00000336180 FAAP24Q9BTP7 215 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms